RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 ZCCHC9Q8N567 271 aaKnown RBP8.97□□□□□ -0.97
TROAP-208ENST00000548817 ZNF513Q8N8E2 541 aaPredicted RBP8.97□□□□□ -0.97
TROAP-208ENST00000548817 B3GALNT2Q8NCR0 500 aa8.97□□□□□ -0.97
TROAP-208ENST00000548817 ZNF507Q8TCN5 953 aa8.97□□□□□ -0.97
TROAP-208ENST00000548817 SNRNP27Q8WVK2 155 aaKnown RBP8.97□□□□□ -0.97
TROAP-208ENST00000548817 USP28Q96RU2 1077 aa8.97□□□□□ -0.97
TROAP-208ENST00000548817 DNAI2Q9GZS0 605 aa8.97□□□□□ -0.97
TROAP-208ENST00000548817 CGNQ9P2M7 1197 aaKnown RBP8.97□□□□□ -0.97
TROAP-208ENST00000548817 CHORDC1Q9UHD1 332 aaPredicted RBP8.97□□□□□ -0.97
TROAP-208ENST00000548817 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.97□□□□□ -0.97
TROAP-208ENST00000548817 BTBD3Q9Y2F9 522 aa8.97□□□□□ -0.97
TROAP-208ENST00000548817 STARD13Q9Y3M8 1113 aa8.97□□□□□ -0.97
TROAP-208ENST00000548817 MORC2Q9Y6X9 1032 aaPredicted RBP8.97□□□□□ -0.97
TROAP-208ENST00000548817 UBE4BO95155 1302 aa8.97□□□□□ -0.97
TROAP-208ENST00000548817 PTPRJQ12913 1337 aa8.97□□□□□ -0.97
TROAP-208ENST00000548817 MYH10P35580 1976 aa8.97□□□□□ -0.97
TROAP-208ENST00000548817 USP9YO00507 2555 aaPredicted RBP8.96□□□□□ -0.97
TROAP-208ENST00000548817 PYCARD-AS1I3L0S3 204 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 CLDN5O00501 218 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 PAPSS1O43252 624 aaPredicted RBP8.96□□□□□ -0.98
TROAP-208ENST00000548817 EXOC3O60645 756 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 OAS1P00973 400 aaKnown RBP8.96□□□□□ -0.98
TROAP-208ENST00000548817 GP1BBP13224 206 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 CD6P30203 668 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 AP3M2P53677 418 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 MYL6P60660 151 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 GOLGA8FQ08AF8 430 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 GOLGA8DPQ0D2H9 430 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 KCNH2Q12809 1159 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 TBC1D25Q3MII6 688 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 ZNF667Q5HYK9 610 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 LY6G5CQ5SRR4 150 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 ZNF574Q6ZN55 896 aaPredicted RBP8.96□□□□□ -0.98
TROAP-208ENST00000548817 SFTPA1Q8IWL2 248 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 NELFCDQ8IXH7 590 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 PHTF2Q8N3S3 785 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 NAT16Q8N8M0 369 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 ZNF248Q8NDW4 579 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 GOLGA5Q8TBA6 731 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 IPO4Q8TEX9 1081 aaKnown RBP8.96□□□□□ -0.98
TROAP-208ENST00000548817 TTC9Q92623 222 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 HPS3Q969F9 1004 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 DHX58Q96C10 678 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 XPO6Q96QU8 1125 aaKnown RBP8.96□□□□□ -0.98
TROAP-208ENST00000548817 ARID3AQ99856 593 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 B3GNT5Q9BYG0 378 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 TRIM9Q9C026 710 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 SEMA4CQ9C0C4 833 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 ZNF518BQ9C0D4 1074 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 PCED1AQ9H1Q7 454 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 MAGEF1Q9HAY2 307 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 CD248Q9HCU0 757 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 DMAP1Q9NPF5 467 aaPredicted RBP8.96□□□□□ -0.98
TROAP-208ENST00000548817 AGPAT3Q9NRZ7 376 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 KBTBD4Q9NVX7 518 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 COMMD8Q9NX08 183 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 FTSJ1Q9UET6 329 aa8.96□□□□□ -0.98
TROAP-208ENST00000548817 A0A087X0B3 334 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 STX6O43752 255 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 CUTAO60888 179 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 AP1G2O75843 785 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 STAU1O95793 577 aaKnown RBP8.95□□□□□ -0.98
TROAP-208ENST00000548817 OLFM2O95897 454 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 IRF1P10914 325 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 NCAM1P13591 858 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 MAOBP27338 520 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 NASPP49321 788 aaPredicted RBP8.95□□□□□ -0.98
TROAP-208ENST00000548817 CCT8P50990 548 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 AFF3P51826 1226 aaKnown RBP8.95□□□□□ -0.98
TROAP-208ENST00000548817 ZXDBP98169 803 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 BNC1Q01954 994 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 MESP2Q0VG99 397 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 SERINC3Q13530 473 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 ZNF699Q32M78 642 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 C10orf76Q5T2E6 689 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 GRAMD4Q6IC98 578 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 UNC13DQ70J99 1090 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 EPM2AIP1Q7L775 607 aaPredicted RBP8.95□□□□□ -0.98
TROAP-208ENST00000548817 ERICH1Q86X53 443 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 TERB1Q8NA31 727 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 SCFD1Q8WVM8 642 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 SMARCD1Q96GM5 515 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 INTS4Q96HW7 963 aaKnown RBP8.95□□□□□ -0.98
TROAP-208ENST00000548817 LGMNQ99538 433 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 GABRG3Q99928 467 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 C7orf25Q9BPX7 421 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 DPEP3Q9H4B8 488 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 FBXO44Q9H4M3 255 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 OSGEPQ9NPF4 335 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.95□□□□□ -0.985e-17■■■■■ 409.9
TROAP-208ENST00000548817 SPHK2Q9NRA0 654 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 FOXD4L1Q9NU39 408 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 FAM13BQ9NYF5 915 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 GMIPQ9P107 970 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 WDR35Q9P2L0 1181 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 TFIP11Q9UBB9 837 aaKnown RBP8.95□□□□□ -0.98
TROAP-208ENST00000548817 LSM7Q9UK45 103 aaKnown RBP8.95□□□□□ -0.98
TROAP-208ENST00000548817 CREBBPQ92793 2442 aa8.95□□□□□ -0.98
TROAP-208ENST00000548817 TLN1Q9Y490 2541 aaKnown RBP8.95□□□□□ -0.98
TROAP-208ENST00000548817 GFRA2O00451 464 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms