RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TARSL2A2RTX5 802 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 C5orf58C9J3I9 102 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 RBAK-RBAKDNI3L0D1 243 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 AP3D1O14617 1153 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 SEPT4O43236 478 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 SLIT3O75094 1523 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 SOAT2O75908 522 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 PROSCO94903 275 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 FGBP02675 491 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 LTFP02788 710 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 SNRPAP09012 282 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 CSH1P0DML2 217 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 CSH2P0DML3 217 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 EPB42P16452 691 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 HDCP19113 662 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 MZF1P28698 734 aaPredicted RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 SLC8A1P32418 973 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 MAGEA4P43358 317 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 TUBP50607 506 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 PTK7Q13308 1070 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 PPIGQ13427 754 aaKnown RBP eCLIP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 ZNF268Q14587 947 aaPredicted RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 PSMD5Q16401 504 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 NFIL3Q16649 462 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 PHKG1Q16816 387 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 CLEC16AQ2KHT3 1053 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 FAM83EQ2M2I3 478 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 UNC93AQ86WB7 457 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 LPPQ93052 612 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 DACT3Q96B18 629 aaPredicted RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 MTMR9Q96QG7 549 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 BRD8Q9H0E9 1235 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 ADA2Q9NZK5 511 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 SELENONQ9NZV5 590 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 LNPEPQ9UIQ6 1025 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 SMG5Q9UPR3 1016 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 GIT1Q9Y2X7 761 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 SPACA6W5XKT8 324 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 H2AFYO75367 372 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 PLEKP08567 350 aaPredicted RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 MYL2P10916 166 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 PTPN1P18031 435 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 EEF1B2P24534 225 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 SLC12A3P55017 1021 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 PTENP60484 403 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 ABCE1P61221 599 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 OLR1P78380 273 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 GRIK3Q13003 919 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 CAPSQ13938 189 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 LRRC14Q15048 493 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 HECTD3Q5T447 861 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 C1orf186Q6ZWK4 172 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 CCNJLQ8IV13 435 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 RGL4Q8IZJ4 473 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 CCDC33Q8N5R6 958 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 INPP4AQ96PE3 977 aaPredicted RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 NAT9Q9BTE0 207 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 CDT1Q9H211 546 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 BLOC1S4Q9NUP1 217 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 FAM105AQ9NUU6 356 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 ZFP69BQ9UJL9 534 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 APPL1Q9UKG1 709 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 RAB23Q9ULC3 237 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 PDZK1P1A8MUH7 402 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 IGSF6O95976 241 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 INHAP05111 366 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 MMP3P08254 477 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 HSPA1AP0DMV8 641 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 HSPA1BP0DMV9 641 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 POLR2EP19388 210 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 RPL9P32969 192 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 GGCXP38435 758 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 FNTAP49354 379 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 CTCFP49711 727 aaPredicted RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 ITGA8P53708 1063 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 HDAC4P56524 1084 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 OTUD4Q01804 1114 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 ILDR2Q71H61 639 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 LZTR1Q8N653 840 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 WWP1Q9H0M0 922 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 TMEM165Q9HC07 324 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 CYLDQ9NQC7 956 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 ADGRB2O60241 1585 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 CYP3A7-CYP3A51PA0A087WV96 503 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 SMIM35A0A1B0GVV1 85 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 ANKRD63C9JTQ0 380 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 ANGPT2O15123 496 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 ABCB7O75027 752 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 CLASP2O75122 1294 aaKnown RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 MICAL2O94851 1124 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 CPEP16870 476 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 LAG3P18627 525 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 CYP3A7P24462 503 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 PBLDP30039 288 aaPredicted RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 COILP38432 576 aaPredicted RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 INPP1P49441 399 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 POU4F1Q01851 419 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 CAMK2GQ13555 558 aaPredicted RBP7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 EFR3AQ14156 821 aa7.1□□□□□ -1.27
SRGAP1-206ENST00000543397 KCNA10Q16322 511 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms