RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 FAM153AQ9UHL3 310 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 CCT8L1PA6NM43 557 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 ZNF57Q68EA5 555 aaPredicted RBP11.03□□□□□ -0.64
GABRB3-204ENST00000541819 ACOT1Q86TX2 421 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 METTL16Q86W50 562 aaKnown RBP11.03□□□□□ -0.64
GABRB3-204ENST00000541819 FBXO36Q8NEA4 188 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.03□□□□□ -0.64
GABRB3-204ENST00000541819 KCNH7Q9NS40 1196 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 AXIN2Q9Y2T1 843 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 SNPHO15079 494 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 ACSL4O60488 711 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 ACOX1Q15067 660 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 ALG11Q2TAA5 492 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 ARMC3Q5W041 872 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 TMC7Q7Z402 723 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 STRA8Q7Z7C7 330 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 NT5DC3Q86UY8 548 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 COL23A1Q86Y22 540 aaPredicted RBP11.03□□□□□ -0.64
GABRB3-204ENST00000541819 TDRD5Q8NAT2 981 aaKnown RBP11.03□□□□□ -0.64
GABRB3-204ENST00000541819 GJD4Q96KN9 370 aaPredicted RBP11.03□□□□□ -0.64
GABRB3-204ENST00000541819 STARD7Q9NQZ5 370 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 ROBO2Q9HCK4 1378 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 TRIM43BA6NCK2 446 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 RAD51BO15315 384 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 THP07101 528 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 AKAP5P24588 427 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 ITGA1P56199 1179 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 R3HDM1Q15032 1099 aaKnown RBP11.03□□□□□ -0.64
GABRB3-204ENST00000541819 NR6A1Q15406 480 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 ARMC4Q5T2S8 1044 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 KLHDC7AQ5VTJ3 777 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 HEATR4Q86WZ0 1026 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 USP38Q8NB14 1042 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 ISCA1Q9BUE6 129 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 ARHGAP28Q9P2N2 729 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 PHTF1Q9UMS5 762 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 OGTO15294 1046 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 KPNA6O60684 536 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 PDE5AO76074 875 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 OR56A5P0C7T3 313 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 LBPP18428 481 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 MYL12AP19105 171 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 TARSP26639 723 aaKnown RBP11.03□□□□□ -0.64
GABRB3-204ENST00000541819 BIKQ13323 160 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 KPNB1Q14974 876 aaKnown RBP11.03□□□□□ -0.64
GABRB3-204ENST00000541819 RCN1Q15293 331 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 FAM98BQ52LJ0 330 aaKnown RBP11.03□□□□□ -0.64
GABRB3-204ENST00000541819 CBWD3Q5JTY5 395 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 CBWD5Q5RIA9 395 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 CCNI2Q6ZMN8 369 aaPredicted RBP11.03□□□□□ -0.64
GABRB3-204ENST00000541819 RASGRP2Q7LDG7 609 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 FAM20CQ8IXL6 584 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 IZUMO1Q8IYV9 350 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 FAM172AQ8WUF8 416 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 LRRC39Q96DD0 335 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 CGRRF1Q99675 332 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 KLHL25Q9H0H3 589 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 TUBE1Q9UJT0 475 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 ZNF112Q9UJU3 913 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 STARD13Q9Y3M8 1113 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 ATG7O95352 703 aa11.02□□□□□ -0.64
GABRB3-204ENST00000541819 MPOP05164 745 aa11.02□□□□□ -0.64
GABRB3-204ENST00000541819 CLK3P49761 638 aaKnown RBP11.02□□□□□ -0.64
GABRB3-204ENST00000541819 CSHL1Q14406 222 aa11.02□□□□□ -0.64
GABRB3-204ENST00000541819 EPC2Q52LR7 807 aa11.02□□□□□ -0.64
GABRB3-204ENST00000541819 PRMT9Q6P2P2 845 aa11.02□□□□□ -0.64
GABRB3-204ENST00000541819 BTN2A1Q7KYR7 527 aa11.02□□□□□ -0.64
GABRB3-204ENST00000541819 SPPL2AQ8TCT8 520 aa11.02□□□□□ -0.64
GABRB3-204ENST00000541819 KCNB2Q92953 911 aa11.02□□□□□ -0.64
GABRB3-204ENST00000541819 FAM136AQ96C01 138 aa11.02□□□□□ -0.64
GABRB3-204ENST00000541819 WDR24Q96S15 920 aa11.02□□□□□ -0.64
GABRB3-204ENST00000541819 CHP1Q99653 195 aa11.02□□□□□ -0.64
GABRB3-204ENST00000541819 DLGAP2Q9P1A6 1054 aa11.02□□□□□ -0.64
GABRB3-204ENST00000541819 HLA-DQA2P01906 255 aa11.02□□□□□ -0.64
GABRB3-204ENST00000541819 KLRC2P26717 231 aa11.02□□□□□ -0.64
GABRB3-204ENST00000541819 HPCAL1P37235 193 aa11.02□□□□□ -0.64
GABRB3-204ENST00000541819 SYN2Q92777 582 aaPredicted RBP11.02□□□□□ -0.64
GABRB3-204ENST00000541819 TAAR1Q96RJ0 339 aa11.02□□□□□ -0.64
GABRB3-204ENST00000541819 NAT9Q9BTE0 207 aa11.02□□□□□ -0.64
GABRB3-204ENST00000541819 CELF4Q9BZC1 486 aaKnown RBP11.02□□□□□ -0.64
GABRB3-204ENST00000541819 ADPRHL2Q9NX46 363 aa11.02□□□□□ -0.64
GABRB3-204ENST00000541819 SMNDC1O75940 238 aaKnown RBP eCLIP11.02□□□□□ -0.65
GABRB3-204ENST00000541819 KRT33AO76009 404 aa11.02□□□□□ -0.65
GABRB3-204ENST00000541819 CCR4P51679 360 aa11.02□□□□□ -0.65
GABRB3-204ENST00000541819 TSC22D1Q15714 1073 aa11.02□□□□□ -0.65
GABRB3-204ENST00000541819 SLC45A4Q5BKX6 768 aa11.02□□□□□ -0.65
GABRB3-204ENST00000541819 APLFQ8IW19 511 aaPredicted RBP11.02□□□□□ -0.65
GABRB3-204ENST00000541819 EID3Q8N140 333 aa11.02□□□□□ -0.65
GABRB3-204ENST00000541819 ATG4CQ96DT6 458 aa11.02□□□□□ -0.65
GABRB3-204ENST00000541819 RACGAP1Q9H0H5 632 aa11.02□□□□□ -0.65
GABRB3-204ENST00000541819 KANSL3Q9P2N6 904 aa11.02□□□□□ -0.65
GABRB3-204ENST00000541819 MBD2Q9UBB5 411 aa11.02□□□□□ -0.65
GABRB3-204ENST00000541819 RBAK-RBAKDNI3L0D1 243 aa11.02□□□□□ -0.65
GABRB3-204ENST00000541819 MYL12BO14950 172 aa11.02□□□□□ -0.65
GABRB3-204ENST00000541819 ALDH2P05091 517 aa11.02□□□□□ -0.65
GABRB3-204ENST00000541819 IL6P05231 212 aa11.02□□□□□ -0.65
GABRB3-204ENST00000541819 DNAJB2P25686 324 aa11.02□□□□□ -0.65
GABRB3-204ENST00000541819 RPA1P27694 616 aa11.02□□□□□ -0.65
GABRB3-204ENST00000541819 FNDC3BQ53EP0 1204 aaKnown RBP11.02□□□□□ -0.65
GABRB3-204ENST00000541819 RETSATQ6NUM9 610 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms