RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 THUMPD3Q9BV44 507 aaKnown RBP5.88□□□□□ -1.47
DDB1-219ENST00000541513 CCDC94Q9BW85 323 aaPredicted RBP5.88□□□□□ -1.47
DDB1-219ENST00000541513 PITHD1Q9GZP4 211 aaPredicted RBP5.88□□□□□ -1.47
DDB1-219ENST00000541513 A1CFQ9NQ94 594 aaKnown RBP5.88□□□□□ -1.47
DDB1-219ENST00000541513 SNTG1Q9NSN8 517 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 ZNF624Q9P2J8 865 aaPredicted RBP5.88□□□□□ -1.47
DDB1-219ENST00000541513 SRRDQ9UH36 339 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 TSPYL4Q9UJ04 414 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 DNMT3LQ9UJW3 386 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 ANAPC5Q9UJX4 755 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 CAPN11Q9UMQ6 739 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 ANGPTL3Q9Y5C1 460 aa5.88□□□□□ -1.47
DDB1-219ENST00000541513 ARHGAP10A1A4S6 786 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 NPIPB15A6NHN6 443 aaPredicted RBP5.87□□□□□ -1.47
DDB1-219ENST00000541513 FAM90A27PA6NNH2 459 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 A8MVJ9 347 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 AKR1B15C9JRZ8 316 aaPredicted RBP5.87□□□□□ -1.47
DDB1-219ENST00000541513 E7EVH7 732 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 ZBTB43O43298 467 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 DNPH1O43598 174 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 NPHS1O60500 1241 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 RNGTTO60942 597 aaKnown RBP5.87□□□□□ -1.47
DDB1-219ENST00000541513 ENTPD3O75355 529 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 CAMTA2O94983 1202 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 HEXBP07686 556 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 GSTM1P09488 218 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 GARSP41250 739 aaKnown RBP5.87□□□□□ -1.47
DDB1-219ENST00000541513 CDK7P50613 346 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 HSD17B4P51659 736 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 ALDH18A1P54886 795 aaKnown RBP5.87□□□□□ -1.47
DDB1-219ENST00000541513 SH3BGRP55822 239 aaPredicted RBP5.87□□□□□ -1.47
DDB1-219ENST00000541513 EIF4A1P60842 406 aaKnown RBP5.87□□□□□ -1.47
DDB1-219ENST00000541513 NSUN2Q08J23 767 aaKnown RBP eCLIP5.87□□□□□ -1.47
DDB1-219ENST00000541513 CAMK1Q14012 370 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 SCARF1Q14162 830 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 SMU1Q2TAY7 513 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 FAM69AQ5T7M9 428 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 TRAT1Q6PIZ9 186 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 FAM180AQ6UWF9 173 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 CYP2R1Q6VVX0 501 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 RUFY3Q7L099 469 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 GPR149Q86SP6 731 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 CPNE8Q86YQ8 564 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 KRTAP1-3Q8IUG1 177 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 SP8Q8IXZ3 490 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 CDYL2Q8N8U2 506 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 DCBLD1Q8N8Z6 715 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 GALNT11Q8NCW6 608 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 NLGN2Q8NFZ4 835 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 GABPB2Q8TAK5 448 aaPredicted RBP5.87□□□□□ -1.47
DDB1-219ENST00000541513 SEPT1Q8WYJ6 367 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 GBP5Q96PP8 586 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 TEX13AQ9BXU3 409 aaPredicted RBP5.87□□□□□ -1.47
DDB1-219ENST00000541513 ZCWPW1Q9H0M4 648 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 PCDHAC1Q9H158 963 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 THAP9Q9H5L6 903 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 MANSC1Q9H8J5 431 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 CHODLQ9H9P2 273 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 SSU72Q9NP77 194 aaKnown RBP5.87□□□□□ -1.47
DDB1-219ENST00000541513 HEYLQ9NQ87 328 aaPredicted RBP5.87□□□□□ -1.47
DDB1-219ENST00000541513 SNX15Q9NRS6 342 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 ZDHHC7Q9NXF8 308 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 TAS2R3Q9NYW6 316 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 MRPL15Q9P015 296 aaKnown RBP5.87□□□□□ -1.47
DDB1-219ENST00000541513 DNAJB9Q9UBS3 223 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 SUN2Q9UH99 717 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 CCNL1Q9UK58 526 aaPredicted RBP5.87□□□□□ -1.47
DDB1-219ENST00000541513 HPCAL4Q9UM19 191 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 LIPT1Q9Y234 373 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 AP1M2Q9Y6Q5 423 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 ZBED9Q6R2W3 1325 aa5.87□□□□□ -1.47
DDB1-219ENST00000541513 CASZ1Q86V15 1759 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 C4AP0C0L4 1744 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 COL24A1Q17RW2 1714 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 CNTNAP4Q9C0A0 1308 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 A0A1W2PQ09 198 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 SHISA3A0PJX4 238 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 SLC35F4A4IF30 521 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 KRIT1O00522 736 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 CASQ2O14958 399 aaPredicted RBP5.86□□□□□ -1.47
DDB1-219ENST00000541513 WDR46O15213 610 aaKnown RBP5.86□□□□□ -1.47
DDB1-219ENST00000541513 KLHL41O60662 606 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 NOL3O60936 208 aaKnown RBP5.86□□□□□ -1.47
DDB1-219ENST00000541513 GUCY1B2O75343 617 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 APOL3O95236 402 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 HOXB7P09629 217 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 SNRPA1P09661 255 aaKnown RBP5.86□□□□□ -1.47
DDB1-219ENST00000541513 CCDC175P0C221 793 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 CKBP12277 381 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 HOXC8P31273 242 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 SLC6A9P48067 706 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 ZBTB16Q05516 673 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 ITPK1Q13572 414 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 NFE2L1Q14494 772 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 NAA25Q14CX7 972 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 NOMO1Q15155 1222 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 TRADDQ15628 312 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 CEP55Q53EZ4 464 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 EMC4Q5J8M3 183 aa5.86□□□□□ -1.47
DDB1-219ENST00000541513 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms