RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 PCDHB18PQ96TA0 734 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 FAM167BQ9BTA0 163 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 RUSC1Q9BVN2 902 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 NUP85Q9BW27 656 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 TRABDQ9H4I3 376 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 PIF1Q9H611 641 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 GPAMQ9HCL2 828 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 SRA1Q9HD15 236 aaKnown RBP7.98□□□□□ -1.13
CCDC60-204ENST00000539847 ZDHHC7Q9NXF8 308 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 ZFP69BQ9UJL9 534 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 HAO1Q9UJM8 370 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 ANGPTL2Q9UKU9 493 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 TMCO1Q9UM00 188 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 TRIM33Q9UPN9 1127 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 TBC1D30Q9Y2I9 924 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 PCDHA1Q9Y5I3 950 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 COMMD3-BMI1R4GMX3 469 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 BAZ2BQ9UIF8 2168 aaKnown RBP7.98□□□□□ -1.13
CCDC60-204ENST00000539847 CACNA1HO95180 2353 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 ZMYM2Q9UBW7 1377 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 SCN5AQ14524 2016 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 TCRBV7S2A1N4TA0A589 114 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 LCHNA4D1U4 455 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 KLF11O14901 512 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 SLITRK3O94933 977 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 ARIH2O95376 493 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 PSMG1O95456 288 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 AMHP03971 560 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 TGFB3P10600 412 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 ADSSP30520 456 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 HOXC8P31273 242 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 PTPN7P35236 360 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 CHKAP35790 457 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 KCNJ1P48048 391 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 GPC3P51654 580 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 VAMP7P51809 220 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 DEFB103AP81534 67 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 ITGA9Q13797 1035 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 HNRNPDQ14103 355 aaKnown RBP7.97□□□□□ -1.13
CCDC60-204ENST00000539847 CCDC6Q16204 474 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 GNPTABQ3T906 1256 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 EFHC2Q5JST6 749 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 LRRC38Q5VT99 294 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 HHATQ5VTY9 493 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 SDE2Q6IQ49 451 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 AAGABQ6PD74 315 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 NLRP9Q7RTR0 991 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 ARHGAP22Q7Z5H3 698 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 PCGF5Q86SE9 256 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 SERINC5Q86VE9 423 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 DNAAF5Q86Y56 855 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 TRIM42Q8IWZ5 723 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 SRRM1Q8IYB3 904 aaKnown RBP7.97□□□□□ -1.13
CCDC60-204ENST00000539847 KATNAL2Q8IYT4 538 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 EXD1Q8NHP7 514 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.97□□□□□ -1.13
CCDC60-204ENST00000539847 UHMK1Q8TAS1 419 aaKnown RBP7.97□□□□□ -1.13
CCDC60-204ENST00000539847 GDAP1Q8TB36 358 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 SYTL5Q8TDW5 730 aaPredicted RBP7.97□□□□□ -1.13
CCDC60-204ENST00000539847 COPS5Q92905 334 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 PABPC5Q96DU9 382 aaKnown RBP7.97□□□□□ -1.13
CCDC60-204ENST00000539847 OLFM3Q96PB7 478 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 GBP5Q96PP8 586 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 ACCSQ96QU6 501 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 HAPLN3Q96S86 360 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 INSM2Q96T92 566 aaPredicted RBP7.97□□□□□ -1.13
CCDC60-204ENST00000539847 DHRS4Q9BTZ2 278 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 AMNQ9BXJ7 453 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 CADM1Q9BY67 442 aaKnown RBP7.97□□□□□ -1.13
CCDC60-204ENST00000539847 GRIP2Q9C0E4 1043 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 BHMT2Q9H2M3 363 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 SUDS3Q9H7L9 328 aaPredicted RBP7.97□□□□□ -1.13
CCDC60-204ENST00000539847 KIAA1586Q9HCI6 787 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 CD320Q9NPF0 282 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 NMRK1Q9NWW6 199 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 TOR4AQ9NXH8 423 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 DLGAP2Q9P1A6 1054 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 SORCS3Q9UPU3 1222 aa7.97□□□□□ -1.13
CCDC60-204ENST00000539847 MRPL11Q9Y3B7 192 aaKnown RBP7.97□□□□□ -1.13
CCDC60-204ENST00000539847 EXOC1LA0A1B0GW35 172 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 H3BNC9 293 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 DNALI1O14645 258 aaPredicted RBP7.96□□□□□ -1.14
CCDC60-204ENST00000539847 MSH4O15457 936 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 CLDN3O15551 220 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 DCXO43602 365 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 FKBP6O75344 327 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 PSMD10O75832 226 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 PROSCO94903 275 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 KCNA5P22460 613 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 TARSP26639 723 aaKnown RBP7.96□□□□□ -1.14
CCDC60-204ENST00000539847 GCAP28676 217 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 EPHB2P29323 1055 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 PHBP35232 272 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 MARCKSL1P49006 195 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 CACNA2D1P54289 1103 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 FMO1Q01740 532 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 MCL1Q07820 350 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 ARHGAP44Q17R89 818 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 LY6KQ17RY6 165 aa7.96□□□□□ -1.14
CCDC60-204ENST00000539847 QRICH1Q2TAL8 776 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms