RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 CKBP12277 381 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 EPB42P16452 691 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 TKTL1P51854 596 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 RCN1Q15293 331 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 MDM1Q8TC05 714 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 SLC5A5Q92911 643 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 ASB2Q96Q27 587 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 DCLRE1BQ9H816 532 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 L2HGDHQ9H9P8 463 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 RXFP1Q9HBX9 757 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 NT5MQ9NPB1 228 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 TMCO1Q9UM00 188 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 SHOC2Q9UQ13 582 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 TNS2Q63HR2 1409 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 TRDMT1O14717 391 aaKnown RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 RAD51BO15315 384 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 CPA3P15088 417 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 GUCA1AP43080 201 aaPredicted RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 ALDH5A1P51649 535 aaPredicted RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 ATXN3P54252 364 aaPredicted RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 CORO7P57737 925 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 MGAT5Q09328 741 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 PPIL2Q13356 520 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 GALNTL6Q49A17 601 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 PAN2Q504Q3 1202 aaKnown RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 ATP6AP1LQ52LC2 224 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 SPDYCQ5MJ68 293 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 CDKAL1Q5VV42 579 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 ZCCHC8Q6NZY4 707 aaKnown RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 BNC2Q6ZN30 1099 aaPredicted RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 SV2AQ7L0J3 742 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 ZNF571Q7Z3V5 609 aaPredicted RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 LRRC34Q8IZ02 419 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 EPS8L3Q8TE67 593 aaKnown RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 VPS33AQ96AX1 596 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 POP1Q99575 1024 aaKnown RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 FDXACB1Q9BRP7 624 aaPredicted RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 C10orf88Q9H8K7 445 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 PCDHA3Q9Y5H8 950 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 ZW10O43264 779 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 PAEPP09466 180 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 CSE1LP55060 971 aaKnown RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 EFEMP1Q12805 493 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 NFYCQ13952 458 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 NCF4Q15080 339 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 RASA2Q15283 850 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 PGS1Q32NB8 556 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 TMEM119Q4V9L6 283 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 MARC1Q5VT66 337 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 PDPK2PQ6A1A2 396 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 FICDQ9BVA6 458 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 PRKD2Q9BZL6 878 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 WDR41Q9HAD4 459 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 TAF6LQ9Y6J9 622 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 RNF103O00237 685 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 AKAP3O75969 853 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 PCNAP12004 261 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 RARRES1P49788 294 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 NDST1P52848 882 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 FKBP1CQ5VVH2 108 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 SCARA3Q6AZY7 606 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 MCOLN2Q8IZK6 566 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 CPNE1Q99829 537 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 ELOVL4Q9GZR5 314 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 ABHD16BQ9H3Z7 469 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 RBM22Q9NW64 420 aaKnown RBP eCLIP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 PDP2Q9P2J9 529 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 TFR2Q9UP52 801 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 PLA2G4CQ9UP65 541 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 ACOT9Q9Y305 439 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 VPS4BO75351 444 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 DARSP14868 501 aaKnown RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 PAX3P23760 479 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 KLRK1P26718 216 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 CCDC142Q17RM4 750 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 KCNT1Q5JUK3 1230 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 NT5DC1Q5TFE4 455 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 ZNF557Q8N988 423 aaPredicted RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 TAS1R2Q8TE23 839 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 ATG4AQ8WYN0 398 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 ZCCHC2Q9C0B9 1178 aaKnown RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 AVENQ9NQS1 362 aaPredicted RBP6.66□□□□□ -1.34
LSAMP-207ENST00000539563 MEGF6O75095 1541 aa6.66□□□□□ -1.34
LSAMP-207ENST00000539563 LOC100653049A0A140TA62 436 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 NFIBO00712 420 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 KRT34O76011 436 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 RPN2P04844 631 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 SERPINF2P08697 491 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 ERVK-10P10266 1014 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 MSH3P20585 1137 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 TBX4P57082 545 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 PKN1Q16512 942 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 C9orf131Q5VYM1 1079 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 ZNF544Q6NX49 715 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 C1QTNF7Q9BXJ2 289 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 AGXT2Q9BYV1 514 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 GPAMQ9HCL2 828 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 CHORDC1Q9UHD1 332 aaPredicted RBP6.65□□□□□ -1.34
LSAMP-207ENST00000539563 VPS28Q9UK41 221 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 ADAM30Q9UKF2 790 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms