RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 GINM1Q9NU53 330 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 SEPT10Q9P0V9 454 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 SIRPGQ9P1W8 387 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 KCNN3Q9UGI6 736 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 MOSPD1Q9UJG1 213 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 KIAA1257Q9ULG3 409 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 PCDHA12Q9UN75 941 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 TRAF6Q9Y4K3 522 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 VWA5AO00534 786 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 VEGFAP15692 232 aaPredicted RBP12.82□□□□□ -0.36
USP3-203ENST00000538686 POLR2CP19387 275 aaPredicted RBP12.82□□□□□ -0.36
USP3-203ENST00000538686 TGM1P22735 817 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 GABRB3P28472 473 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 CLK3P49761 638 aaKnown RBP12.82□□□□□ -0.36
USP3-203ENST00000538686 PHC1P78364 1004 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 CTBSQ01459 385 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 PRKCQQ04759 706 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 PTP4A2Q12974 167 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 ATAD3BQ5T9A4 648 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 C16orf89Q6UX73 402 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 ARCQ7LC44 396 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 PCGF5Q86SE9 256 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 SLC38A6Q8IZM9 456 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 ABTB2Q8N961 1025 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 SHKBP1Q8TBC3 707 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 DCAKDQ8WVC6 231 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 PEX13Q92968 403 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 SDCCAG3Q96C92 435 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 NPLQ9BXD5 320 aaPredicted RBP12.82□□□□□ -0.36
USP3-203ENST00000538686 DHX33Q9H6R0 707 aaKnown RBP12.82□□□□□ -0.36
USP3-203ENST00000538686 APEX2Q9UBZ4 518 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 ZHX2Q9Y6X8 837 aa12.82□□□□□ -0.36
USP3-203ENST00000538686 A0A1B0GTW7 788 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 COPEO14579 308 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 ASNA1O43681 348 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 SNNO75324 88 aaPredicted RBP12.81□□□□□ -0.36
USP3-203ENST00000538686 SERPINB1P30740 379 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 L1CAMP32004 1257 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 HPCAL1P37235 193 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 GNA12Q03113 381 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 CDC20Q12834 499 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 TEX44Q53QW1 395 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 HYIQ5T013 277 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 GPR107Q5VW38 600 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 EPS8L1Q8TE68 723 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 AFG1LQ8WV93 481 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 TANKQ92844 425 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 COQ7Q99807 217 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 ZBED2Q9BTP6 218 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 EFHD1Q9BUP0 239 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 B3GNT4Q9C0J1 378 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 GPR88Q9GZN0 384 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 VRTNQ9H8Y1 702 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 C6orf50Q9HD87 102 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 DIABLOQ9NR28 239 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 IL20Q9NYY1 176 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 SCAF8Q9UPN6 1271 aaKnown RBP12.81□□□□□ -0.36
USP3-203ENST00000538686 ATRNL1Q5VV63 1379 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 ARAP2Q8WZ64 1704 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 TMCC2O75069 709 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 JRKO75564 520 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 IL32P24001 234 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 PKLRP30613 574 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 NUDT1P36639 197 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 MRPS22P82650 360 aaKnown RBP12.81□□□□□ -0.36
USP3-203ENST00000538686 PPP2R2BQ00005 443 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 FCHO2Q0JRZ9 810 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 TRAF2Q12933 501 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 IDO2Q6ZQW0 420 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 KRT28Q7Z3Y7 464 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 JDP2Q8WYK2 163 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 SLC5A5Q92911 643 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 PGBD4Q96DM1 585 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 MRRFQ96E11 262 aaKnown RBP12.81□□□□□ -0.36
USP3-203ENST00000538686 PKP2Q99959 881 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.81□□□□□ -0.362e-6■■■□□ 18.4
USP3-203ENST00000538686 IFT122Q9HBG6 1241 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 PARVAQ9NVD7 372 aa12.81□□□□□ -0.36
USP3-203ENST00000538686 SCN11AQ9UI33 1791 aa12.8□□□□□ -0.36
USP3-203ENST00000538686 LRRIQ4A6NIV6 560 aa12.8□□□□□ -0.36
USP3-203ENST00000538686 UNCXA6NJT0 531 aa12.8□□□□□ -0.36
USP3-203ENST00000538686 SNTNA6NMZ2 147 aa12.8□□□□□ -0.36
USP3-203ENST00000538686 GABBR2O75899 941 aa12.8□□□□□ -0.36
USP3-203ENST00000538686 AKAP3O75969 853 aa12.8□□□□□ -0.36
USP3-203ENST00000538686 NR3C1P04150 777 aa12.8□□□□□ -0.36
USP3-203ENST00000538686 DDX5P17844 614 aaKnown RBP12.8□□□□□ -0.36
USP3-203ENST00000538686 CD247P20963 164 aa12.8□□□□□ -0.36
USP3-203ENST00000538686 RFC1P35251 1148 aaPredicted RBP12.8□□□□□ -0.36
USP3-203ENST00000538686 PHKA1P46020 1223 aa12.8□□□□□ -0.36
USP3-203ENST00000538686 KLF1Q13351 362 aaPredicted RBP12.8□□□□□ -0.36
USP3-203ENST00000538686 MTMR2Q13614 643 aa12.8□□□□□ -0.36
USP3-203ENST00000538686 IKBKEQ14164 716 aa12.8□□□□□ -0.36
USP3-203ENST00000538686 MGAT5BQ3V5L5 792 aa12.8□□□□□ -0.36
USP3-203ENST00000538686 CEP78Q5JTW2 689 aa12.8□□□□□ -0.36
USP3-203ENST00000538686 GADL1Q6ZQY3 521 aa12.8□□□□□ -0.36
USP3-203ENST00000538686 PLEKHG7Q6ZR37 379 aa12.8□□□□□ -0.36
USP3-203ENST00000538686 DENND5BQ6ZUT9 1274 aa12.8□□□□□ -0.36
USP3-203ENST00000538686 HEATR3Q7Z4Q2 680 aa12.8□□□□□ -0.36
USP3-203ENST00000538686 CCDC28AQ8IWP9 274 aa12.8□□□□□ -0.36
USP3-203ENST00000538686 NATD1Q8N6N6 113 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms