RNA–Protein interactions for RNA: ENST00000538478.5

LRTOMT-215, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-215ENST00000538478 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.92□□□□□ -1.3
LRTOMT-215ENST00000538478 HRH3Q9Y5N1 445 aa6.92□□□□□ -1.3
LRTOMT-215ENST00000538478 CPQQ9Y646 472 aa6.92□□□□□ -1.3
LRTOMT-215ENST00000538478 UNC13CQ8NB66 2214 aa6.92□□□□□ -1.3
LRTOMT-215ENST00000538478 SCN8AQ9UQD0 1980 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 SHANK1Q9Y566 2161 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 DIDO1Q9BTC0 2240 aaKnown RBP6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 CDC14CA4D256 554 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 TMEM229AB2RXF0 380 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 K7ERI5 159 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 HOXC11O43248 304 aaPredicted RBP6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 ODC1P11926 461 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 XRCC6P12956 609 aaKnown RBP eCLIP6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 CYP3A5P20815 502 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 ELAVL4P26378 380 aaKnown RBP6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 ACSL1P33121 698 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 RCAN1P53805 252 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 RPL10AP62906 217 aaKnown RBP6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 CLDN10P78369 228 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 SLC7A9P82251 487 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 BNIP3Q12983 259 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 ADCK5Q3MIX3 580 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 CDCP2Q5VXM1 449 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 WSCD1Q658N2 575 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 CCDC81Q6ZN84 652 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 DHX32Q7L7V1 743 aaKnown RBP6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 FAM124AQ86V42 546 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 CACUL1Q86Y37 369 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 PTRH1Q86Y79 214 aaKnown RBP6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 SNX19Q92543 992 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 PRR11Q96HE9 360 aaPredicted RBP6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 MTMR9Q96QG7 549 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 PKMYT1Q99640 499 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 SLC26A6Q9BXS9 759 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 C22orf23Q9BZE7 217 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 OSGEPQ9NPF4 335 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 SH3GLB2Q9NR46 395 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 DEC1Q9P2X7 70 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 UXTQ9UBK9 157 aaPredicted RBP6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 RBM19Q9Y4C8 960 aaKnown RBP6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 PCDHB5Q9Y5E4 795 aa6.91□□□□□ -1.3
LRTOMT-215ENST00000538478 LACTBL1A8MY62 500 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 PIRO00625 290 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 HCRTO43612 131 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 CCNT1O60563 726 aaKnown RBP6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 USP12O75317 370 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 MED24O75448 989 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 OLFM2O95897 454 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 IGHDP01880 384 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 CPA1P15085 419 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 COL8A1P27658 744 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 TNFRSF8P28908 595 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 PLA2G4AP47712 749 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 EFNA5P52803 228 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 COPAP53621 1224 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 GAD2Q05329 585 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 ST3GAL1Q11201 340 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 SMARCB1Q12824 385 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 ILKQ13418 452 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 CLCA4Q14CN2 919 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 INAVAQ3KP66 663 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 ZSCAN23Q3MJ62 389 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 C9orf57Q5W0N0 161 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 MPZL3Q6UWV2 235 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 APBB1IPQ7Z5R6 666 aaPredicted RBP6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 CATSPER3Q86XQ3 398 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 TMPRSS6Q8IU80 811 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 TICAM1Q8IUC6 712 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 KIAA1958Q8N8K9 716 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 RUFY2Q8WXA3 655 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 BIRC7Q96CA5 298 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 CCDC97Q96F63 343 aaPredicted RBP6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 CCDC43Q96MW1 224 aaKnown RBP6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 ELF4Q99607 663 aaPredicted RBP6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 NUP58Q9BVL2 599 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 RNF26Q9BY78 433 aaPredicted RBP6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 TTC12Q9H892 705 aaPredicted RBP6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 POLR1BQ9H9Y6 1135 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 EBF2Q9HAK2 575 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 TIMMDC1Q9NPL8 285 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 ZNF358Q9NW07 568 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 LRWD1Q9UFC0 647 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 ADAMTS1Q9UHI8 967 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 NAP1L2Q9ULW6 460 aaPredicted RBP6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 PLAAQ9Y263 795 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 STON1Q9Y6Q2 735 aa6.9□□□□□ -1.3
LRTOMT-215ENST00000538478 PRRC2CQ9Y520 2896 aaKnown RBP6.89□□□□□ -1.31
LRTOMT-215ENST00000538478 ZNF840PA6NDX5 716 aa6.89□□□□□ -1.31
LRTOMT-215ENST00000538478 CYB561D2O14569 222 aa6.89□□□□□ -1.31
LRTOMT-215ENST00000538478 SLC9A3R1O14745 358 aaPredicted RBP6.89□□□□□ -1.31
LRTOMT-215ENST00000538478 WNT9AO14904 365 aa6.89□□□□□ -1.31
LRTOMT-215ENST00000538478 TSPAN3O60637 253 aa6.89□□□□□ -1.31
LRTOMT-215ENST00000538478 OAS1P00973 400 aaKnown RBP6.89□□□□□ -1.31
LRTOMT-215ENST00000538478 ITGAVP06756 1048 aa6.89□□□□□ -1.31
LRTOMT-215ENST00000538478 CISD3P0C7P0 127 aa6.89□□□□□ -1.31
LRTOMT-215ENST00000538478 CKMT2P17540 419 aa6.89□□□□□ -1.31
LRTOMT-215ENST00000538478 ACP1P24666 158 aa6.89□□□□□ -1.31
LRTOMT-215ENST00000538478 GRNP28799 593 aaKnown RBP6.89□□□□□ -1.31
LRTOMT-215ENST00000538478 OXTRP30559 389 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms