RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 PCDHGC3Q9UN70 934 aa8.8□□□□□ -1
SPARC-208ENST00000538026 SH3BP1Q9Y3L3 701 aa8.8□□□□□ -1
SPARC-208ENST00000538026 CNOT1A5YKK6 2376 aaKnown RBP8.8□□□□□ -1
SPARC-208ENST00000538026 SLC12A8A0AV02 714 aa8.79□□□□□ -1
SPARC-208ENST00000538026 FAM170AA1A519 330 aa8.79□□□□□ -1
SPARC-208ENST00000538026 PRR23AA6NEV1 266 aa8.79□□□□□ -1
SPARC-208ENST00000538026 LGALS16A8MUM7 142 aa8.79□□□□□ -1
SPARC-208ENST00000538026 CHURC1-FNTBB4DL54 471 aa8.79□□□□□ -1
SPARC-208ENST00000538026 E5RJQ4 531 aa8.79□□□□□ -1
SPARC-208ENST00000538026 SLC9A3R1O14745 358 aaPredicted RBP8.79□□□□□ -1
SPARC-208ENST00000538026 LAMTOR5O43504 91 aa8.79□□□□□ -1
SPARC-208ENST00000538026 HRO43593 1189 aa8.79□□□□□ -1
SPARC-208ENST00000538026 TULP3O75386 442 aa8.79□□□□□ -1
SPARC-208ENST00000538026 IGLV3-27P01718 113 aa8.79□□□□□ -1
SPARC-208ENST00000538026 RALAP11233 206 aa8.79□□□□□ -1
SPARC-208ENST00000538026 ADH5P11766 374 aa8.79□□□□□ -1
SPARC-208ENST00000538026 CYP11B1P15538 503 aa8.79□□□□□ -1
SPARC-208ENST00000538026 TRIM21P19474 475 aaKnown RBP8.79□□□□□ -1
SPARC-208ENST00000538026 DRD1P21728 446 aa8.79□□□□□ -1
SPARC-208ENST00000538026 USP8P40818 1118 aa8.79□□□□□ -1
SPARC-208ENST00000538026 KIR2DL1P43626 348 aaPredicted RBP8.79□□□□□ -1
SPARC-208ENST00000538026 CXCL12P48061 93 aa8.79□□□□□ -1
SPARC-208ENST00000538026 PXNP49023 591 aaPredicted RBP8.79□□□□□ -1
SPARC-208ENST00000538026 SGSHP51688 502 aa8.79□□□□□ -1
SPARC-208ENST00000538026 GRSF1Q12849 480 aaKnown RBP eCLIP8.79□□□□□ -1
SPARC-208ENST00000538026 SRSF5Q13243 272 aaKnown RBP8.79□□□□□ -1
SPARC-208ENST00000538026 PDCLQ13371 301 aa8.79□□□□□ -1
SPARC-208ENST00000538026 MEA1Q16626 185 aa8.79□□□□□ -1
SPARC-208ENST00000538026 KLHL40Q2TBA0 621 aa8.79□□□□□ -1
SPARC-208ENST00000538026 PTPN20Q4JDL3 420 aa8.79□□□□□ -1
SPARC-208ENST00000538026 ARTNQ5T4W7 220 aa8.79□□□□□ -1
SPARC-208ENST00000538026 FYB2Q5VWT5 728 aa8.79□□□□□ -1
SPARC-208ENST00000538026 NOP9Q86U38 636 aaKnown RBP8.79□□□□□ -1
SPARC-208ENST00000538026 DDX42Q86XP3 938 aaKnown RBP eCLIP8.79□□□□□ -1
SPARC-208ENST00000538026 FAM217AQ8IXS0 508 aa8.79□□□□□ -1
SPARC-208ENST00000538026 SYNPOQ8N3V7 929 aa8.79□□□□□ -1
SPARC-208ENST00000538026 USP33Q8TEY7 942 aa8.79□□□□□ -1
SPARC-208ENST00000538026 IRGQQ8WZA9 623 aa8.79□□□□□ -1
SPARC-208ENST00000538026 OTUB2Q96DC9 234 aa8.79□□□□□ -1
SPARC-208ENST00000538026 BPIFA3Q9BQP9 254 aa8.79□□□□□ -1
SPARC-208ENST00000538026 STK33Q9BYT3 514 aa8.79□□□□□ -1
SPARC-208ENST00000538026 LHX5Q9H2C1 402 aa8.79□□□□□ -1
SPARC-208ENST00000538026 MARK1Q9P0L2 795 aa8.79□□□□□ -1
SPARC-208ENST00000538026 TBC1D14Q9P2M4 693 aa8.79□□□□□ -1
SPARC-208ENST00000538026 NAALADL1Q9UQQ1 740 aa8.79□□□□□ -1
SPARC-208ENST00000538026 RALGAPA1Q6GYQ0 2036 aa8.79□□□□□ -1
SPARC-208ENST00000538026 PI4KAP42356 2102 aa8.78□□□□□ -1
SPARC-208ENST00000538026 NUMA1Q14980 2115 aa8.78□□□□□ -1
SPARC-208ENST00000538026 CACNA1AO00555 2505 aa8.78□□□□□ -1
SPARC-208ENST00000538026 GOLGA6L7A0A1B0GV03 622 aa8.78□□□□□ -1
SPARC-208ENST00000538026 PRRT4C9JH25 899 aa8.78□□□□□ -1
SPARC-208ENST00000538026 F8VZ95 297 aa8.78□□□□□ -1
SPARC-208ENST00000538026 ADAM23O75077 832 aa8.78□□□□□ -1
SPARC-208ENST00000538026 KAT7O95251 611 aa8.78□□□□□ -1
SPARC-208ENST00000538026 PENKP01210 267 aaPredicted RBP8.78□□□□□ -1
SPARC-208ENST00000538026 IGLV3-25P01717 112 aa8.78□□□□□ -1
SPARC-208ENST00000538026 LTFP02788 710 aa8.78□□□□□ -1
SPARC-208ENST00000538026 ERBB2P04626 1255 aa8.78□□□□□ -1
SPARC-208ENST00000538026 TYRP14679 529 aa8.78□□□□□ -1
SPARC-208ENST00000538026 CORO1AP31146 461 aaKnown RBP8.78□□□□□ -1
SPARC-208ENST00000538026 CDH5P33151 784 aaPredicted RBP8.78□□□□□ -1
SPARC-208ENST00000538026 FNTBP49356 437 aa8.78□□□□□ -1
SPARC-208ENST00000538026 SLC8A3P57103 927 aa8.78□□□□□ -1
SPARC-208ENST00000538026 COG7P83436 770 aa8.78□□□□□ -1
SPARC-208ENST00000538026 LRRC32Q14392 662 aa8.78□□□□□ -1
SPARC-208ENST00000538026 SYCP1Q15431 976 aa8.78□□□□□ -1
SPARC-208ENST00000538026 C2CD6Q53TS8 623 aa8.78□□□□□ -1
SPARC-208ENST00000538026 FAM133BQ5BKY9 247 aaKnown RBP8.78□□□□□ -1
SPARC-208ENST00000538026 OTUD1Q5VV17 481 aaPredicted RBP8.78□□□□□ -1
SPARC-208ENST00000538026 BTBD8Q5XKL5 378 aa8.78□□□□□ -1
SPARC-208ENST00000538026 RNF43Q68DV7 783 aa8.78□□□□□ -1
SPARC-208ENST00000538026 SMYD5Q6GMV2 418 aa8.78□□□□□ -1
SPARC-208ENST00000538026 NADSYN1Q6IA69 706 aa8.78□□□□□ -1
SPARC-208ENST00000538026 TMEM92Q6UXU6 159 aa8.78□□□□□ -1
SPARC-208ENST00000538026 TPGS1Q6ZTW0 290 aa8.78□□□□□ -1
SPARC-208ENST00000538026 DENND1CQ8IV53 801 aa8.78□□□□□ -1
SPARC-208ENST00000538026 SIX6OS1Q8N1H7 587 aa8.78□□□□□ -1
SPARC-208ENST00000538026 ARHGAP18Q8N392 663 aa8.78□□□□□ -1
SPARC-208ENST00000538026 C1orf131Q8NDD1 294 aaKnown RBP8.78□□□□□ -1
SPARC-208ENST00000538026 RPLP0P6Q8NHW5 317 aa8.78□□□□□ -1
SPARC-208ENST00000538026 ADAM32Q8TC27 787 aa8.78□□□□□ -1
SPARC-208ENST00000538026 EPS8L1Q8TE68 723 aa8.78□□□□□ -1
SPARC-208ENST00000538026 DQX1Q8TE96 717 aaKnown RBP8.78□□□□□ -1
SPARC-208ENST00000538026 SLC20A1Q8WUM9 679 aa8.78□□□□□ -1
SPARC-208ENST00000538026 BHMTQ93088 406 aa8.78□□□□□ -1
SPARC-208ENST00000538026 SLC39A13Q96H72 371 aa8.78□□□□□ -1
SPARC-208ENST00000538026 FCRL2Q96LA5 508 aaPredicted RBP8.78□□□□□ -1
SPARC-208ENST00000538026 FAM81BQ96LP2 452 aa8.78□□□□□ -1
SPARC-208ENST00000538026 NAP1L5Q96NT1 182 aaPredicted RBP8.78□□□□□ -1
SPARC-208ENST00000538026 PNKPQ96T60 521 aa8.78□□□□□ -1
SPARC-208ENST00000538026 PCDHB18PQ96TA0 734 aa8.78□□□□□ -1
SPARC-208ENST00000538026 DNAI2Q9GZS0 605 aa8.78□□□□□ -1
SPARC-208ENST00000538026 NACA2Q9H009 215 aa8.78□□□□□ -1
SPARC-208ENST00000538026 CD248Q9HCU0 757 aa8.78□□□□□ -1
SPARC-208ENST00000538026 ABCC13Q9NSE7 274 aa8.78□□□□□ -1
SPARC-208ENST00000538026 FAM207AQ9NSI2 230 aaPredicted RBP8.78□□□□□ -1
SPARC-208ENST00000538026 PLK2Q9NYY3 685 aa8.78□□□□□ -1
SPARC-208ENST00000538026 XPO7Q9UIA9 1087 aaKnown RBP8.78□□□□□ -1
SPARC-208ENST00000538026 STOML2Q9UJZ1 356 aa8.78□□□□□ -1
SPARC-208ENST00000538026 NOCTQ9UK39 431 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms