RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 DOCK9Q9BZ29 2069 aa10.1□□□□□ -0.79
CPSF7-217ENST00000537162 A0A087X0B3 334 aa10.09□□□□□ -0.79
CPSF7-217ENST00000537162 FAM47DPA6NHR8 397 aa10.09□□□□□ -0.79
CPSF7-217ENST00000537162 COCHO43405 550 aa10.09□□□□□ -0.79
CPSF7-217ENST00000537162 GREM1O60565 184 aa10.09□□□□□ -0.79
CPSF7-217ENST00000537162 GIMD1P0DJR0 217 aa10.09□□□□□ -0.79
CPSF7-217ENST00000537162 IRF1P10914 325 aa10.09□□□□□ -0.79
CPSF7-217ENST00000537162 CKMT1AP12532 417 aa10.09□□□□□ -0.79
CPSF7-217ENST00000537162 PEX3P56589 373 aa10.09□□□□□ -0.79
CPSF7-217ENST00000537162 TSPY1Q01534 308 aa10.09□□□□□ -0.79
CPSF7-217ENST00000537162 AKAP17AQ02040 695 aaKnown RBP10.09□□□□□ -0.79
CPSF7-217ENST00000537162 KCNJ12Q14500 433 aa10.09□□□□□ -0.79
CPSF7-217ENST00000537162 CHD1LQ86WJ1 897 aa10.09□□□□□ -0.79
CPSF7-217ENST00000537162 DDX42Q86XP3 938 aaKnown RBP eCLIP10.09□□□□□ -0.79
CPSF7-217ENST00000537162 ARL14Q8N4G2 192 aa10.09□□□□□ -0.79
CPSF7-217ENST00000537162 ARRDC3Q96B67 414 aa10.09□□□□□ -0.79
CPSF7-217ENST00000537162 MOCOSQ96EN8 888 aa10.09□□□□□ -0.79
CPSF7-217ENST00000537162 RNF26Q9BY78 433 aaPredicted RBP10.09□□□□□ -0.79
CPSF7-217ENST00000537162 TMEM134Q9H6X4 195 aa10.09□□□□□ -0.79
CPSF7-217ENST00000537162 ARHGAP28Q9P2N2 729 aa10.09□□□□□ -0.79
CPSF7-217ENST00000537162 PCDHA12Q9UN75 941 aa10.09□□□□□ -0.79
CPSF7-217ENST00000537162 PTPRJQ12913 1337 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 TLR4O00206 839 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 FFAR2O15552 330 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 ATP2C2O75185 946 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 EPHX1P07099 455 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 CLTAP09496 248 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 GCFC2P16383 781 aaKnown RBP10.08□□□□□ -0.8
CPSF7-217ENST00000537162 PPP2R3AQ06190 1150 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 MCL1Q07820 350 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 TAF10Q12962 218 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 NECTIN1Q15223 517 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 CFAP221Q4G0U5 840 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 INTS6LQ5JSJ4 861 aaKnown RBP10.08□□□□□ -0.8
CPSF7-217ENST00000537162 SCARA3Q6AZY7 606 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 OSTM1Q86WC4 334 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 SLFN12Q8IYM2 578 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 ZNF366Q8N895 744 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 RBBP8NLQ8NC74 664 aaPredicted RBP10.08□□□□□ -0.8
CPSF7-217ENST00000537162 OR2T3Q8NH03 318 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 MAPK15Q8TD08 544 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 HPS3Q969F9 1004 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 XPO6Q96QU8 1125 aaKnown RBP10.08□□□□□ -0.8
CPSF7-217ENST00000537162 TTLL2Q9BWV7 592 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 LSG1Q9H089 658 aaKnown RBP10.08□□□□□ -0.8
CPSF7-217ENST00000537162 ABCG4Q9H172 646 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 DONSONQ9NYP3 566 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 KCNJ14Q9UNX9 436 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 SH3BP1Q9Y3L3 701 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 SNX14Q9Y5W7 946 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 PCSK5Q92824 1860 aa10.08□□□□□ -0.8
CPSF7-217ENST00000537162 SCN8AQ9UQD0 1980 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 CCDC196A0A1B0GTZ2 297 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 ARHGEF35A5YM69 484 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 FAM189A1O60320 539 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 TOM1L1O75674 476 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 BAG4O95429 457 aaKnown RBP10.07□□□□□ -0.8
CPSF7-217ENST00000537162 ITGA2BP08514 1039 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 ZNF132P52740 706 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 PDX1P52945 283 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 RCAN1P53805 252 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 CDH8P55286 799 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 RPS14P62263 151 aaKnown RBP10.07□□□□□ -0.8
CPSF7-217ENST00000537162 HDAC1Q13547 482 aaPredicted RBP10.07□□□□□ -0.8
CPSF7-217ENST00000537162 ADCK5Q3MIX3 580 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 CRTC1Q6UUV9 634 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 DENND5BQ6ZUT9 1274 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 C14orf80Q86SX3 495 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 SPATA2LQ8IUW3 424 aaPredicted RBP10.07□□□□□ -0.8
CPSF7-217ENST00000537162 RASEFQ8IZ41 740 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 DAW1Q8N136 415 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 PDCL2Q8N4E4 241 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 OR4C6Q8NH72 309 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 RNF25Q96BH1 459 aaPredicted RBP10.07□□□□□ -0.8
CPSF7-217ENST00000537162 SPATA17Q96L03 361 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 APOLD1Q96LR9 279 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 CCSER1Q9C0I3 900 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 ERVMER34-1Q9H9K5 563 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 NCOA5Q9HCD5 579 aaKnown RBP10.07□□□□□ -0.8
CPSF7-217ENST00000537162 DDX43Q9NXZ2 648 aaKnown RBP10.07□□□□□ -0.8
CPSF7-217ENST00000537162 DKK3Q9UBP4 350 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 SERGEFQ9UGK8 458 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 FBXO10Q9UK96 956 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 L1RE1Q9UN81 338 aa10.07□□□□□ -0.8
CPSF7-217ENST00000537162 TDRD6O60522 2096 aaKnown RBP10.06□□□□□ -0.8
CPSF7-217ENST00000537162 WNT7AO00755 349 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 SLC16A4O15374 487 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 XPOTO43592 962 aaKnown RBP10.06□□□□□ -0.8
CPSF7-217ENST00000537162 ADRB2P07550 413 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 CPA1P15085 419 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 BDNFP23560 247 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 TXKP42681 527 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 TAF6P49848 677 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 GALCP54803 685 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 MYL7Q01449 175 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 CAMK2GQ13555 558 aaPredicted RBP10.06□□□□□ -0.8
CPSF7-217ENST00000537162 MANEAQ5SRI9 462 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 TMEM215Q68D42 235 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 BORAQ6PGQ7 559 aa10.06□□□□□ -0.8
CPSF7-217ENST00000537162 NCEH1Q6PIU2 408 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms