RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442		A0A1W2PPL8	197 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CYP1A1	P04798	512 aa	Predicted RBP	5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	JUN	P05412	331 aa	Known RBP	5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	FTH1P19	P0C7X4	201 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ALOX15	P16050	662 aa	Predicted RBP	5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CST5	P28325	142 aa	Predicted RBP	5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ABCG1	P45844	678 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	NRIP1	P48552	1158 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	TRAPPC10	P48553	1259 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	FMO1	Q01740	532 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ZNF543	Q08ER8	600 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	TCP10	Q12799	353 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CHAF1A	Q13111	956 aa	Predicted RBP	5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	FKBP1C	Q5VVH2	108 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	TSSK4	Q6SA08	328 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CARF	Q8N187	725 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442		Q8N3U1	123 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	OR2C3	Q8N628	320 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ENAH	Q8N8S7	591 aa	Predicted RBP	5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	OR14K1	Q8NGZ2	314 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	DEPTOR	Q8TB45	409 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ADAMTS17	Q8TE56	1095 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	NELL1	Q92832	810 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	PPP2R3C	Q969Q6	453 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	DACT3	Q96B18	629 aa	Predicted RBP	5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CEP95	Q96GE4	821 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	RPL10L	Q96L21	214 aa	Known RBP	5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	C1orf43	Q9BWL3	253 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	MRPL46	Q9H2W6	279 aa	Known RBP	5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	FZD8	Q9H461	694 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	WDCP	Q9H6R7	721 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	PPCS	Q9HAB8	311 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	BARX1	Q9HBU1	254 aa	Predicted RBP	5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	KIAA1586	Q9HCI6	787 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	FEZ2	Q9UHY8	353 aa	Predicted RBP	5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CDH22	Q9UJ99	828 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CA14	Q9ULX7	337 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	DUSP12	Q9UNI6	340 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ZDHHC9	Q9Y397	364 aa		5.26	□□□□□ -1.57
ECHDC1-223	ENST00000534442	SALL3	Q9BXA9	1300 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	NOTCH1	P46531	2555 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	HIVEP3	Q5T1R4	2406 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	SPTBN1	Q01082	2364 aa	Known RBP	5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442		A0A087WV48	116 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	TBX3	O15119	743 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	TCEA3	O75764	348 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CNMD	O75829	334 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	AHSG	P02765	367 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	SBK3	P0C264	359 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CEACAM1	P13688	526 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	TNFSF4	P23510	183 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	SLC7A1	P30825	629 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	HOXA7	P31268	230 aa	Predicted RBP	5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ALDH1A3	P47895	512 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	STK3	Q13188	491 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	SP140	Q13342	867 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	NFYC	Q13952	458 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	RNF151	Q2KHN1	245 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	GAGE13	Q4V321	117 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	HSP90AB3P	Q58FF7	597 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	FAM26F	Q5R3K3	315 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ATG14	Q6ZNE5	492 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ADGRE4P	Q86SQ3	457 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	RBM23	Q86U06	439 aa	Known RBP	5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	SESTD1	Q86VW0	696 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	PLXDC1	Q8IUK5	500 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	TP53I13	Q8NBR0	393 aa	Predicted RBP	5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CFHR4	Q92496	578 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CDC5L	Q99459	802 aa	Known RBP	5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	MYOC	Q99972	504 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	SEMA4C	Q9C0C4	833 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	PRORY	Q9H606	182 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CPNE7	Q9UBL6	633 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	SLC23A1	Q9UHI7	598 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	NRBP1	Q9UHY1	535 aa		5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CNOT6	Q9ULM6	557 aa	Known RBP	5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	RUVBL1	Q9Y265	456 aa	Known RBP	5.25	□□□□□ -1.57
ECHDC1-223	ENST00000534442	FRMPD4	Q14CM0	1322 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	C9orf118	A6NHY6	69 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	PRSS29P	A6NIE9	313 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ISM1	B1AKI9	464 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442		F5H6K3	240 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442		F8W8V4	182 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	MATN2	O00339	956 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	FOS	P01100	380 aa	Predicted RBP	5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CD1A	P06126	327 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	IQCF3	P0C7M6	154 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	RPL17	P18621	184 aa	Known RBP	5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	HDC	P19113	662 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CTNNB1	P35222	781 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ARFIP2	P53365	341 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	SUMO3	P55854	103 aa	Predicted RBP	5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	HTRA4	P83105	476 aa	Predicted RBP	5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	TDG	Q13569	410 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	ITGA7	Q13683	1181 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	KRT72	Q14CN4	511 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	CNGA2	Q16280	664 aa		5.24	□□□□□ -1.57
ECHDC1-223	ENST00000534442	C4orf46	Q504U0	113 aa		5.24	□□□□□ -1.57

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