RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 FAM57BQ71RH2 274 aa3.53□□□□□ -1.84
BRCA2-205ENST00000533776 FSTL5Q8N475 847 aaPredicted RBP3.53□□□□□ -1.84
BRCA2-205ENST00000533776 RBMXL3Q8N7X1 1067 aaKnown RBP3.53□□□□□ -1.84
BRCA2-205ENST00000533776 STAG1Q8WVM7 1258 aa3.53□□□□□ -1.84
BRCA2-205ENST00000533776 ASB5Q8WWX0 329 aa3.53□□□□□ -1.84
BRCA2-205ENST00000533776 PIGKQ92643 395 aa3.53□□□□□ -1.84
BRCA2-205ENST00000533776 CTAGE1Q96RT6 745 aa3.53□□□□□ -1.84
BRCA2-205ENST00000533776 FAM83DQ9H4H8 585 aa3.53□□□□□ -1.84
BRCA2-205ENST00000533776 SAP30LQ9HAJ7 183 aa3.53□□□□□ -1.84
BRCA2-205ENST00000533776 DKK4Q9UBT3 224 aa3.53□□□□□ -1.84
BRCA2-205ENST00000533776 VPS51Q9UID3 782 aa3.53□□□□□ -1.84
BRCA2-205ENST00000533776 OGDHLQ9ULD0 1010 aa3.53□□□□□ -1.84
BRCA2-205ENST00000533776 C16orf96A6NNT2 1141 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 FRS3O43559 492 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 NDUFB8O95169 186 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 MAP4K4O95819 1239 aaPredicted RBP3.52□□□□□ -1.85
BRCA2-205ENST00000533776 MBPP02686 304 aaPredicted RBP3.52□□□□□ -1.85
BRCA2-205ENST00000533776 FGF2P09038 288 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 TMIGD3P0DMS9 266 aaPredicted RBP3.52□□□□□ -1.85
BRCA2-205ENST00000533776 ST6GAL1P15907 406 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 BTF3P20290 206 aaKnown RBP3.52□□□□□ -1.85
BRCA2-205ENST00000533776 HOXA7P31268 230 aaPredicted RBP3.52□□□□□ -1.85
BRCA2-205ENST00000533776 HTR7P34969 479 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 IL6STP40189 918 aaPredicted RBP3.52□□□□□ -1.85
BRCA2-205ENST00000533776 VPS41P49754 854 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 COPAP53621 1224 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 RAE1P78406 368 aaKnown RBP3.52□□□□□ -1.85
BRCA2-205ENST00000533776 FMO1Q01740 532 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 CLCA4Q14CN2 919 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 MANEALQ5VSG8 457 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 DLK2Q6UY11 383 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 RFX8Q6ZV50 586 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 B4GALNT4Q76KP1 1039 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 ZPBPQ9BS86 351 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 AGO4Q9HCK5 861 aaKnown RBP3.52□□□□□ -1.85
BRCA2-205ENST00000533776 TMEM8AQ9HCN3 771 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 VPS4AQ9UN37 437 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 L1RE1Q9UN81 338 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 HPSEQ9Y251 543 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 HEMK1Q9Y5R4 338 aaPredicted RBP3.52□□□□□ -1.85
BRCA2-205ENST00000533776 CKAP5Q14008 2032 aa3.52□□□□□ -1.85
BRCA2-205ENST00000533776 SPATA31A1Q5TZJ5 1347 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 TMEM272A0A1B0GTI8 110 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 A0A1W2PPC1 479 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 A6NNZ2 444 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 ZNF814B7Z6K7 855 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 F8W810 466 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 CTIFO43310 598 aaKnown RBP3.51□□□□□ -1.85
BRCA2-205ENST00000533776 WDR47O94967 919 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 INMTO95050 263 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 RPS6KB1P23443 525 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 CDC25AP30304 524 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 EPHB1P54762 984 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 SLC12A2P55011 1212 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 RHDQ02161 417 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 PPATQ06203 517 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 CNGA3Q16281 694 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 MZT2AQ6P582 158 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 UNC13DQ70J99 1090 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 SESTD1Q86VW0 696 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 TMEM199Q8N511 208 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.51□□□□□ -1.85
BRCA2-205ENST00000533776 B4GALNT2Q8NHY0 566 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 IPCEF1Q8WWN9 437 aaPredicted RBP3.51□□□□□ -1.85
BRCA2-205ENST00000533776 LRTOMTQ8WZ04 291 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 SELENOOQ9BVL4 669 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 LRRC27Q9C0I9 530 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 ZCWPW1Q9H0M4 648 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 ZNF287Q9HBT7 754 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 MOV10Q9HCE1 1003 aaKnown RBP3.51□□□□□ -1.85
BRCA2-205ENST00000533776 DECR2Q9NUI1 292 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 MSRB1Q9NZV6 116 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 SEMA5BQ9P283 1151 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 ZNF112Q9UJU3 913 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 PCDHB2Q9Y5E7 798 aa3.51□□□□□ -1.85
BRCA2-205ENST00000533776 PRSS44E7EML9 344 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 FOXN3O00409 490 aaPredicted RBP3.5□□□□□ -1.85
BRCA2-205ENST00000533776 UGDHO60701 494 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 USP12O75317 370 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 EPN2O95208 641 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 TGFB3P10600 412 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 IDUAP35475 653 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 ALDH7A1P49419 539 aaKnown RBP3.5□□□□□ -1.85
BRCA2-205ENST00000533776 CACNB3P54284 484 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 MTAPQ13126 283 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 DNASE1L3Q13609 305 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 ODF3L2Q3SX64 289 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 ARHGAP29Q52LW3 1261 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 RNF220Q5VTB9 566 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 CXorf57Q6NSI4 855 aaKnown RBP3.5□□□□□ -1.85
BRCA2-205ENST00000533776 RBM44Q6ZP01 1051 aaKnown RBP3.5□□□□□ -1.85
BRCA2-205ENST00000533776 ADGRF4Q8IZF3 695 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 ZNF479Q96JC4 524 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 TUBB6Q9BUF5 446 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 VPS33BQ9H267 617 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 SLCO5A1Q9H2Y9 848 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 FAM204AQ9H8W3 233 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 AS3MTQ9HBK9 375 aa3.5□□□□□ -1.85
BRCA2-205ENST00000533776 C1orf112Q9NSG2 853 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms