RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 AOX1Q06278 1338 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 AQP7P3A6NL99 342 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 E9PLN8 166 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 H7C4K7 107 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 DNPH1O43598 174 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 USP1O94782 785 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 SUN1O94901 812 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 GYS1P13807 737 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 PECAM1P16284 738 aaPredicted RBP5.01□□□□□ -1.61
USP47-211ENST00000531513 LIFRP42702 1097 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 PTDSS1P48651 473 aaKnown RBP5.01□□□□□ -1.61
USP47-211ENST00000531513 AARSP49588 968 aaKnown RBP eCLIP5.01□□□□□ -1.61
USP47-211ENST00000531513 SOX10P56693 466 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 RPS7P62081 194 aaKnown RBP5.01□□□□□ -1.61
USP47-211ENST00000531513 AP2B1P63010 937 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 VAMP2P63027 116 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 PTPRRQ15256 657 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 CD300EQ496F6 205 aaPredicted RBP5.01□□□□□ -1.61
USP47-211ENST00000531513 ATPAF1Q5TC12 328 aaPredicted RBP5.01□□□□□ -1.61
USP47-211ENST00000531513 C4orf50Q6ZRC1 276 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 OR6Y1Q8NGX8 325 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 HTRA1Q92743 480 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 ZBTB10Q96DT7 871 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 LRIG1Q96JA1 1093 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 PGBD1Q96JS3 809 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 VKORC1Q9BQB6 163 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 RTKNQ9BST9 563 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 TAF1DQ9H5J8 278 aaPredicted RBP5.01□□□□□ -1.61
USP47-211ENST00000531513 HELLSQ9NRZ9 838 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 TBC1D22BQ9NU19 505 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 LPAR3Q9UBY5 353 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 SLC45A1Q9Y2W3 748 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 RABGAP1Q9Y3P9 1069 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 NEU2Q9Y3R4 380 aa5.01□□□□□ -1.61
USP47-211ENST00000531513 SETD1BQ9UPS6 1966 aaKnown RBP5□□□□□ -1.61
USP47-211ENST00000531513 ZNF500O60304 480 aaPredicted RBP5□□□□□ -1.61
USP47-211ENST00000531513 DDX58O95786 925 aaKnown RBP5□□□□□ -1.61
USP47-211ENST00000531513 PRKCBP05771 671 aa5□□□□□ -1.61
USP47-211ENST00000531513 ATP1A3P13637 1013 aa5□□□□□ -1.61
USP47-211ENST00000531513 ANXA11P50995 505 aaKnown RBP5□□□□□ -1.61
USP47-211ENST00000531513 ALDH18A1P54886 795 aaKnown RBP5□□□□□ -1.61
USP47-211ENST00000531513 NR1H2P55055 460 aa5□□□□□ -1.61
USP47-211ENST00000531513 ACTR2P61160 394 aa5□□□□□ -1.61
USP47-211ENST00000531513 ZNF844Q08AG5 666 aa5□□□□□ -1.61
USP47-211ENST00000531513 DYRK1AQ13627 763 aa5□□□□□ -1.61
USP47-211ENST00000531513 IQCB1Q15051 598 aa5□□□□□ -1.61
USP47-211ENST00000531513 ZNF750Q32MQ0 723 aa5□□□□□ -1.61
USP47-211ENST00000531513 CFAP52Q8N1V2 620 aa5□□□□□ -1.61
USP47-211ENST00000531513 COG8Q96MW5 612 aa5□□□□□ -1.61
USP47-211ENST00000531513 TRAPPC9Q96Q05 1148 aa5□□□□□ -1.61
USP47-211ENST00000531513 TWSG1Q9GZX9 223 aa5□□□□□ -1.61
USP47-211ENST00000531513 MRPS18AQ9NVS2 196 aaKnown RBP5□□□□□ -1.61
USP47-211ENST00000531513 TMEM160Q9NX00 188 aa5□□□□□ -1.61
USP47-211ENST00000531513 CLIC5Q9NZA1 410 aa5□□□□□ -1.61
USP47-211ENST00000531513 TMOD4Q9NZQ9 345 aa5□□□□□ -1.61
USP47-211ENST00000531513 POLG2Q9UHN1 485 aa5□□□□□ -1.61
USP47-211ENST00000531513 ST3GAL5Q9UNP4 418 aa5□□□□□ -1.61
USP47-211ENST00000531513 CCDC195A0A1B0GUA6 201 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 OR2W5A6NFC9 320 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 LINC01548A6NM66 108 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 EXOC5O00471 708 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 PCDH17O14917 1159 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 IKBKBO14920 756 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 RRP9O43818 475 aaKnown RBP4.99□□□□□ -1.61
USP47-211ENST00000531513 VPS4BO75351 444 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 TK1P04183 234 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 ANXA6P08133 673 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 SRGAP2BP0DMP2 458 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 JUPP14923 745 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 PPP3CBP16298 524 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 SLC5A2P31639 672 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 CCR5P51681 352 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 PRKAA2P54646 552 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 BCAT1P54687 386 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 MC2RQ01718 297 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 UBE3AQ05086 875 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 FPGSQ05932 587 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 BOP1Q14137 746 aaKnown RBP4.99□□□□□ -1.61
USP47-211ENST00000531513 KCNAB1Q14722 419 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 TOMM20Q15388 145 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 DLGAP5Q15398 846 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 ZNF280DQ6N043 979 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 DSTYKQ6XUX3 929 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 KCTD20Q7Z5Y7 419 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 RASAL3Q86YV0 1011 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 RASGRP3Q8IV61 690 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 NRSN1Q8IZ57 195 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 ADGRG5Q8IZF4 528 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 TSPYL6Q8N831 410 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 HVCN1Q96D96 273 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 FAM227BQ96M60 508 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 SLC46A1Q96NT5 459 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 KRTAP1-5Q9BYS1 174 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 IRAK4Q9NWZ3 460 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 ETAA1Q9NY74 926 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 FLRT1Q9NZU1 646 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 DNMT3BQ9UBC3 853 aaKnown RBP4.99□□□□□ -1.61
USP47-211ENST00000531513 AFG3L2Q9Y4W6 797 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 LMTK3Q96Q04 1460 aa4.99□□□□□ -1.61
USP47-211ENST00000531513 ZNF804BA4D1E1 1349 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms