RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 SACM1LQ9NTJ5 587 aa5.32□□□□□ -1.56
PTPRK-220ENST00000531466 PCDHA7Q9UN72 937 aa5.32□□□□□ -1.56
PTPRK-220ENST00000531466 SLC27A6Q9Y2P4 619 aa5.32□□□□□ -1.56
PTPRK-220ENST00000531466 PAXBP1Q9Y5B6 917 aa5.32□□□□□ -1.56
PTPRK-220ENST00000531466 HEMK1Q9Y5R4 338 aaPredicted RBP5.32□□□□□ -1.56
PTPRK-220ENST00000531466 USP19O94966 1318 aa5.31□□□□□ -1.56
PTPRK-220ENST00000531466 SPATA31A1Q5TZJ5 1347 aa5.31□□□□□ -1.56
PTPRK-220ENST00000531466 A0A0G2JK05 382 aa5.31□□□□□ -1.56
PTPRK-220ENST00000531466 TRIM43BA6NCK2 446 aa5.31□□□□□ -1.56
PTPRK-220ENST00000531466 ACOT8O14734 319 aa5.31□□□□□ -1.56
PTPRK-220ENST00000531466 USP12O75317 370 aa5.31□□□□□ -1.56
PTPRK-220ENST00000531466 IGKV3-20P01619 116 aa5.31□□□□□ -1.56
PTPRK-220ENST00000531466 MBPP02686 304 aaPredicted RBP5.31□□□□□ -1.56
PTPRK-220ENST00000531466 CT47B1P0C2W7 299 aaPredicted RBP5.31□□□□□ -1.56
PTPRK-220ENST00000531466 MYBP10242 640 aa5.31□□□□□ -1.56
PTPRK-220ENST00000531466 YY1P25490 414 aa5.31□□□□□ -1.56
PTPRK-220ENST00000531466 C9orf50Q5SZB4 431 aa5.31□□□□□ -1.56
PTPRK-220ENST00000531466 GFI1BQ5VTD9 330 aa5.31□□□□□ -1.56
PTPRK-220ENST00000531466 GSG1LQ6UXU4 331 aa5.31□□□□□ -1.56
PTPRK-220ENST00000531466 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.31□□□□□ -1.56
PTPRK-220ENST00000531466 P3H2Q8IVL5 708 aa5.31□□□□□ -1.56
PTPRK-220ENST00000531466 ADGRF4Q8IZF3 695 aa5.31□□□□□ -1.56
PTPRK-220ENST00000531466 IQCF1Q8N6M8 205 aa5.31□□□□□ -1.56
PTPRK-220ENST00000531466 TRIM43Q96BQ3 446 aaPredicted RBP5.31□□□□□ -1.56
PTPRK-220ENST00000531466 LRGUKQ96M69 825 aa5.31□□□□□ -1.56
PTPRK-220ENST00000531466 ACO2Q99798 780 aaKnown RBP5.31□□□□□ -1.56
PTPRK-220ENST00000531466 SPTLC2O15270 562 aa5.3□□□□□ -1.56
PTPRK-220ENST00000531466 SNX2O60749 519 aa5.3□□□□□ -1.56
PTPRK-220ENST00000531466 ATG13O75143 517 aa5.3□□□□□ -1.56
PTPRK-220ENST00000531466 TMIGD3P0DMS9 266 aaPredicted RBP5.3□□□□□ -1.56
PTPRK-220ENST00000531466 IDUAP35475 653 aa5.3□□□□□ -1.56
PTPRK-220ENST00000531466 NEK2P51955 445 aa5.3□□□□□ -1.56
PTPRK-220ENST00000531466 SUMO3P55854 103 aaPredicted RBP5.3□□□□□ -1.56
PTPRK-220ENST00000531466 RAE1P78406 368 aaKnown RBP5.3□□□□□ -1.56
PTPRK-220ENST00000531466 GRHL2Q6ISB3 625 aa5.3□□□□□ -1.56
PTPRK-220ENST00000531466 PDXDC1Q6P996 788 aa5.3□□□□□ -1.56
PTPRK-220ENST00000531466 CUZD1Q86UP6 607 aa5.3□□□□□ -1.56
PTPRK-220ENST00000531466 SAP30LQ9HAJ7 183 aa5.3□□□□□ -1.56
PTPRK-220ENST00000531466 THSD1Q9NS62 852 aa5.3□□□□□ -1.56
PTPRK-220ENST00000531466 CPNE7Q9UBL6 633 aa5.3□□□□□ -1.56
PTPRK-220ENST00000531466 H0YGN5 161 aa5.29□□□□□ -1.56
PTPRK-220ENST00000531466 TNFRSF13BO14836 293 aaPredicted RBP5.29□□□□□ -1.56
PTPRK-220ENST00000531466 ACVR2AP27037 513 aa5.29□□□□□ -1.56
PTPRK-220ENST00000531466 VPS41P49754 854 aa5.29□□□□□ -1.56
PTPRK-220ENST00000531466 CPT1AP50416 773 aa5.29□□□□□ -1.56
PTPRK-220ENST00000531466 AGFG1P52594 562 aaKnown RBP5.29□□□□□ -1.56
PTPRK-220ENST00000531466 KRTAP10-5P60370 271 aa5.29□□□□□ -1.56
PTPRK-220ENST00000531466 LTBQ06643 244 aa5.29□□□□□ -1.56
PTPRK-220ENST00000531466 SLC29A2Q14542 456 aa5.29□□□□□ -1.56
PTPRK-220ENST00000531466 KCNAB1Q14722 419 aa5.29□□□□□ -1.56
PTPRK-220ENST00000531466 ANO6Q4KMQ2 910 aa5.29□□□□□ -1.56
PTPRK-220ENST00000531466 KRTAP5-1Q6L8H4 278 aa5.29□□□□□ -1.56
PTPRK-220ENST00000531466 NPNTQ6UXI9 565 aa5.29□□□□□ -1.56
PTPRK-220ENST00000531466 TRAPPC11Q7Z392 1133 aa5.29□□□□□ -1.56
PTPRK-220ENST00000531466 ZNF668Q96K58 619 aaPredicted RBP5.29□□□□□ -1.56
PTPRK-220ENST00000531466 DHX36Q9H2U1 1008 aaKnown RBP5.29□□□□□ -1.56
PTPRK-220ENST00000531466 NMRK2Q9NPI5 230 aa5.29□□□□□ -1.56
PTPRK-220ENST00000531466 HOMER2Q9NSB8 354 aa5.29□□□□□ -1.56
PTPRK-220ENST00000531466 GJB4Q9NTQ9 266 aa5.29□□□□□ -1.56
PTPRK-220ENST00000531466 TMEM225BP0DP42 221 aa5.28□□□□□ -1.56
PTPRK-220ENST00000531466 HSPA6P17066 643 aa5.28□□□□□ -1.56
PTPRK-220ENST00000531466 TPH1P17752 444 aa5.28□□□□□ -1.56
PTPRK-220ENST00000531466 TFEBP19484 476 aa5.28□□□□□ -1.56
PTPRK-220ENST00000531466 RBL1P28749 1068 aa5.28□□□□□ -1.56
PTPRK-220ENST00000531466 KEAP1Q14145 624 aa5.28□□□□□ -1.56
PTPRK-220ENST00000531466 CNGA3Q16281 694 aa5.28□□□□□ -1.56
PTPRK-220ENST00000531466 ZNF329Q86UD4 541 aa5.28□□□□□ -1.56
PTPRK-220ENST00000531466 TMPRSS12Q86WS5 348 aa5.28□□□□□ -1.56
PTPRK-220ENST00000531466 ZBTB34Q8NCN2 500 aa5.28□□□□□ -1.56
PTPRK-220ENST00000531466 SUCLG2Q96I99 432 aa5.28□□□□□ -1.56
PTPRK-220ENST00000531466 SLITRK1Q96PX8 696 aa5.28□□□□□ -1.56
PTPRK-220ENST00000531466 B3GNT5Q9BYG0 378 aa5.28□□□□□ -1.56
PTPRK-220ENST00000531466 FZD3Q9NPG1 666 aa5.28□□□□□ -1.56
PTPRK-220ENST00000531466 DNAJB11Q9UBS4 358 aa5.28□□□□□ -1.56
PTPRK-220ENST00000531466 MID2Q9UJV3 735 aa5.28□□□□□ -1.56
PTPRK-220ENST00000531466 AGO2Q9UKV8 859 aaKnown RBP5.28□□□□□ -1.56
PTPRK-220ENST00000531466 VPS4AQ9UN37 437 aa5.28□□□□□ -1.56
PTPRK-220ENST00000531466 A0A087WYN8 130 aa5.27□□□□□ -1.57
PTPRK-220ENST00000531466 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.27□□□□□ -1.57
PTPRK-220ENST00000531466 FAM227AF5H4B4 570 aa5.27□□□□□ -1.57
PTPRK-220ENST00000531466 MARCH6O60337 910 aa5.27□□□□□ -1.57
PTPRK-220ENST00000531466 CAMTA2O94983 1202 aa5.27□□□□□ -1.57
PTPRK-220ENST00000531466 MLH1P40692 756 aa5.27□□□□□ -1.57
PTPRK-220ENST00000531466 ENTPD1P49961 510 aa5.27□□□□□ -1.57
PTPRK-220ENST00000531466 COPAP53621 1224 aa5.27□□□□□ -1.57
PTPRK-220ENST00000531466 RRP1P56182 461 aaKnown RBP5.27□□□□□ -1.57
PTPRK-220ENST00000531466 SMTNL2Q2TAL5 461 aa5.27□□□□□ -1.57
PTPRK-220ENST00000531466 C3orf38Q5JPI3 329 aa5.27□□□□□ -1.57
PTPRK-220ENST00000531466 SWSAP1Q6NVH7 229 aa5.27□□□□□ -1.57
PTPRK-220ENST00000531466 WFIKKN2Q8TEU8 576 aa5.27□□□□□ -1.57
PTPRK-220ENST00000531466 SMCR8Q8TEV9 937 aaPredicted RBP5.27□□□□□ -1.57
PTPRK-220ENST00000531466 P2RY11Q96G91 374 aa5.27□□□□□ -1.57
PTPRK-220ENST00000531466 SF3B5Q9BWJ5 86 aaKnown RBP5.27□□□□□ -1.57
PTPRK-220ENST00000531466 VPS51Q9UID3 782 aa5.27□□□□□ -1.57
PTPRK-220ENST00000531466 AQP7P3A6NL99 342 aa5.26□□□□□ -1.57
PTPRK-220ENST00000531466 PRSS47A8MTI9 375 aa5.26□□□□□ -1.57
PTPRK-220ENST00000531466 PRPF4O43172 522 aaKnown RBP eCLIP5.26□□□□□ -1.57
PTPRK-220ENST00000531466 GRID2O43424 1007 aa5.26□□□□□ -1.57
PTPRK-220ENST00000531466 BRAFP15056 766 aa5.26□□□□□ -1.57
PTPRK-220ENST00000531466 DNASE1L3Q13609 305 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms