RNA–Protein interactions for RNA: ENST00000530983.5

VPS28-213, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,337 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-213ENST00000530983 TREML1Q86YW5 311 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 ARID3BQ8IVW6 561 aaPredicted RBP19.94■□□□□ 0.78
VPS28-213ENST00000530983 TRIM42Q8IWZ5 723 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 DPP3Q9NY33 737 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 SCN1AP35498 2009 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 FAM159BA6NKW6 160 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 NVLO15381 856 aaKnown RBP19.94■□□□□ 0.78
VPS28-213ENST00000530983 KRT38O76015 456 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 PSMG1O95456 288 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 GSTA2P09210 222 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 TFE3P19532 575 aaPredicted RBP19.94■□□□□ 0.78
VPS28-213ENST00000530983 VHLP40337 213 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 CPA2P48052 419 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 HDAC4P56524 1084 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 CCDC6Q16204 474 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 MUM1Q2TAK8 710 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 PKDCCQ504Y2 493 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 SNX30Q5VWJ9 437 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 ATG16L1Q676U5 607 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 SCUBE3Q8IX30 993 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 MTBPQ96DY7 904 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 ACAP3Q96P50 834 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 MPHOSPH6Q99547 160 aaKnown RBP19.94■□□□□ 0.78
VPS28-213ENST00000530983 EBNA1BP2Q99848 306 aaKnown RBP19.94■□□□□ 0.78
VPS28-213ENST00000530983 C20orf27Q9GZN8 174 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 NRDE2Q9H7Z3 1164 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 PCMTD2Q9NV79 361 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 PPP1R1BQ9UD71 204 aaPredicted RBP19.94■□□□□ 0.78
VPS28-213ENST00000530983 MAD1L1Q9Y6D9 718 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 PLXNA1Q9UIW2 1896 aa19.94■□□□□ 0.78
VPS28-213ENST00000530983 GABBR2O75899 941 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 FESP07332 822 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 TXNP10599 105 aaKnown RBP19.93■□□□□ 0.78
VPS28-213ENST00000530983 RBP5P82980 135 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 SLC6A3Q01959 620 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 GBE1Q04446 702 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 POU5F1BQ06416 359 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 MROH9Q5TGP6 573 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 AP1ARQ63HQ0 302 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 EGFL6Q8IUX8 553 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 FBXO27Q8NI29 283 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 GSDMBQ8TAX9 411 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 LBHD1Q9BQE6 289 aaPredicted RBP19.93■□□□□ 0.78
VPS28-213ENST00000530983 TXNRD2Q9NNW7 524 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 PDGFCQ9NRA1 345 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 CAPN9O14815 690 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 TBX10O75333 385 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 STAU1O95793 577 aaKnown RBP19.93■□□□□ 0.78
VPS28-213ENST00000530983 INSRRP14616 1297 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 CYP2F1P24903 491 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 SLC10A2Q12908 348 aaPredicted RBP19.93■□□□□ 0.78
VPS28-213ENST00000530983 IFNLR1Q8IU57 520 aaPredicted RBP19.93■□□□□ 0.78
VPS28-213ENST00000530983 NUDCD3Q8IVD9 361 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 LMNTD2Q8IXW0 634 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 NDUFAF2Q8N183 169 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 SLC4A5Q9BY07 1137 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 ERAP1Q9NZ08 941 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 GPRC5DQ9NZD1 345 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 C2CD2Q9Y426 696 aa19.93■□□□□ 0.78
VPS28-213ENST00000530983 PAPSS1O43252 624 aaPredicted RBP19.92■□□□□ 0.78
VPS28-213ENST00000530983 MAP3K13O43283 966 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 SNNO75324 88 aaPredicted RBP19.92■□□□□ 0.78
VPS28-213ENST00000530983 PDHA1P08559 390 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 PGM1P36871 562 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 GRIA1P42261 906 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 TMEM110Q86TL2 294 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 CDKL3Q8IVW4 592 aaPredicted RBP19.92■□□□□ 0.78
VPS28-213ENST00000530983 B3GNT5Q9BYG0 378 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 FAM124BQ9H5Z6 455 aaPredicted RBP19.92■□□□□ 0.78
VPS28-213ENST00000530983 MARCOQ9UEW3 520 aaPredicted RBP19.92■□□□□ 0.78
VPS28-213ENST00000530983 DNAJC25-GNG10A0A024R161 153 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 SPDYE5A6NIY4 337 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 B2RBV5 119 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 H3BRJ5 948 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 AHCYL1O43865 530 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 GCATO75600 419 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 TOP3BO95985 862 aaKnown RBP19.92■□□□□ 0.78
VPS28-213ENST00000530983 ENO1P06733 434 aaKnown RBP19.92■□□□□ 0.78
VPS28-213ENST00000530983 KITP10721 976 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 TPSB2P20231 275 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 CRHR1P34998 444 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 SLC34A1Q06495 639 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 STILQ15468 1287 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 TPSAB1Q15661 275 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 APLFQ8IW19 511 aaPredicted RBP19.92■□□□□ 0.78
VPS28-213ENST00000530983 TTC39CQ8N584 583 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 CCDC33Q8N5R6 958 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 LINC01465Q8N7H1 131 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 MAGEB5Q9BZ81 275 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 FAM49BQ9NUQ9 324 aa19.92■□□□□ 0.78
VPS28-213ENST00000530983 PPARGC1AQ9UBK2 798 aaKnown RBP19.92■□□□□ 0.78
VPS28-213ENST00000530983 ZNF487B1APH4 448 aa19.91■□□□□ 0.78
VPS28-213ENST00000530983 VTNP04004 478 aa19.91■□□□□ 0.78
VPS28-213ENST00000530983 BPGMP07738 259 aa19.91■□□□□ 0.78
VPS28-213ENST00000530983 L1CAMP32004 1257 aa19.91■□□□□ 0.78
VPS28-213ENST00000530983 RAP1GDS1P52306 607 aa19.91■□□□□ 0.78
VPS28-213ENST00000530983 AQP5P55064 265 aa19.91■□□□□ 0.78
VPS28-213ENST00000530983 C4orf22Q6V702 233 aa19.91■□□□□ 0.78
VPS28-213ENST00000530983 ACOT1Q86TX2 421 aa19.91■□□□□ 0.78
VPS28-213ENST00000530983 SMC1BQ8NDV3 1235 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms