RNA–Protein interactions for RNA: ENST00000524238.3

HMBOX1-211, Transcript of homeobox containing 1, humanhuman

TSL 2 BASIC

Gene HMBOX1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-211ENST00000524238 CCT7Q99832 543 aa7.78□□□□□ -1.16
HMBOX1-211ENST00000524238 EBF4Q9BQW3 602 aa7.78□□□□□ -1.16
HMBOX1-211ENST00000524238 PI4K2AQ9BTU6 479 aa7.78□□□□□ -1.16
HMBOX1-211ENST00000524238 MECRQ9BV79 373 aa7.78□□□□□ -1.16
HMBOX1-211ENST00000524238 CYP4F11Q9HBI6 524 aa7.78□□□□□ -1.16
HMBOX1-211ENST00000524238 TOPORSQ9NS56 1045 aaPredicted RBP7.78□□□□□ -1.16
HMBOX1-211ENST00000524238 PNPLA3Q9NST1 481 aa7.78□□□□□ -1.16
HMBOX1-211ENST00000524238 MAP3K20Q9NYL2 800 aaKnown RBP7.78□□□□□ -1.16
HMBOX1-211ENST00000524238 MARCOQ9UEW3 520 aaPredicted RBP7.78□□□□□ -1.16
HMBOX1-211ENST00000524238 TUBGCP4Q9UGJ1 667 aa7.78□□□□□ -1.16
HMBOX1-211ENST00000524238 MID2Q9UJV3 735 aa7.78□□□□□ -1.16
HMBOX1-211ENST00000524238 PTBP2Q9UKA9 531 aaKnown RBP7.78□□□□□ -1.16
HMBOX1-211ENST00000524238 PCDHGC3Q9UN70 934 aa7.78□□□□□ -1.16
HMBOX1-211ENST00000524238 GNEQ9Y223 722 aaKnown RBP7.78□□□□□ -1.16
HMBOX1-211ENST00000524238 TMED5Q9Y3A6 229 aa7.78□□□□□ -1.16
HMBOX1-211ENST00000524238 CCDC195A0A1B0GUA6 201 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 FAM159BA6NKW6 160 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 TMEM114B3SHH9 223 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 LGR5O75473 907 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 FBXO21O94952 628 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 ZBED1O96006 694 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 NCF2P19878 526 aaPredicted RBP7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 ALDH1B1P30837 517 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 SLC5A2P31639 672 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 ALDH3B2P48448 385 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 IDH3AP50213 366 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 ZNF132P52740 706 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 GDF10P55107 478 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 YWHAZP63104 245 aaKnown RBP7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 TXNL4AP83876 142 aaKnown RBP7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 MYBPC1Q00872 1141 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 KRT76Q01546 638 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 SLC25A11Q02978 314 aaKnown RBP7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 HERC3Q15034 1050 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 NOMO1Q15155 1222 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 CCDC153Q494R4 210 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 XKR9Q5GH70 373 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 TCHHL1Q5QJ38 904 aaPredicted RBP7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 MBLAC2Q68D91 279 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 LLGL2Q6P1M3 1020 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 BNC2Q6ZN30 1099 aaPredicted RBP7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 DENND5BQ6ZUT9 1274 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 CCDC80Q76M96 950 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 LPCAT2Q7L5N7 544 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 MCF2L2Q86YR7 1114 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 HPS6Q86YV9 775 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 UNC45BQ8IWX7 931 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 FAM71DQ8N9W8 422 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 KCTD6Q8NC69 237 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 RP9Q8TA86 221 aaKnown RBP7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 SPATA18Q8TC71 538 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 DEPDC1BQ8WUY9 529 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 TOP1MTQ969P6 601 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 RTP4Q96DX8 246 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 COX4I2Q96KJ9 171 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 IDI2Q9BXS1 227 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 VPS33BQ9H267 617 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 UBAP1Q9NZ09 502 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 MYRFQ9Y2G1 1151 aa7.77□□□□□ -1.17
HMBOX1-211ENST00000524238 LRRC37AA6NMS7 1700 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 COL2A1P02458 1487 aaPredicted RBP7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 TCRBV7S3A2A0A539 114 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 RGSL1A5PLK6 1076 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 WDR64B1ANS9 1081 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 MED7O43513 233 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 BMP10O95393 424 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 H6PDO95479 791 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 C1QAP02745 245 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 EIF2S1P05198 315 aaKnown RBP7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 GARSP41250 739 aaKnown RBP7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 HARS2P49590 506 aaKnown RBP7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 LIG4P49917 911 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 PRKAA2P54646 552 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 SNAP25P60880 206 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 ABCE1P61221 599 aaKnown RBP7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 DYNLT1P63172 113 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 GAD2Q05329 585 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 ZNF252P-AS1Q0IIN9 211 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 RFTN1Q14699 578 aaPredicted RBP7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 CRY2Q49AN0 593 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 C2CD6Q53TS8 623 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 KRT80Q6KB66 452 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 IYDQ6PHW0 289 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 POU5F2Q8N7G0 328 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 UBR7Q8N806 425 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 KYQ8NBH2 561 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 CMASQ8NFW8 434 aaPredicted RBP7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 CNDP1Q96KN2 507 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 CGRRF1Q99675 332 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 FAM213AQ9BRX8 229 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 EFHD1Q9BUP0 239 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 SLC2A11Q9BYW1 496 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 POPDC2Q9HBU9 364 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 KCNH7Q9NS40 1196 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 ASNSD1Q9NWL6 643 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 RIMS3Q9UJD0 308 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 APPL1Q9UKG1 709 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 SLC8A2Q9UPR5 921 aa7.76□□□□□ -1.17
HMBOX1-211ENST00000524238 AP4S1Q9Y587 144 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms