RNA–Protein interactions for RNA: ENST00000523094.5

CLINT1-206, Transcript of clathrin interactor 1, humanhuman

TSL 2 BASIC

Gene CLINT1, Length 3,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-206ENST00000523094 PHF24Q9UPV7 400 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 WDR81Q562E7 1941 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 ATG7O95352 703 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 TOP3BO95985 862 aaKnown RBP12.8□□□□□ -0.36
CLINT1-206ENST00000523094 APOEP02649 317 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 VAV1P15498 845 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 KCNA2P16389 499 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 TCN1P20061 433 aaPredicted RBP12.8□□□□□ -0.36
CLINT1-206ENST00000523094 SOX11P35716 441 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 PDK3Q15120 406 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 FAXCQ5TGI0 409 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 MROH9Q5TGP6 573 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 CAND1Q86VP6 1230 aaKnown RBP12.8□□□□□ -0.36
CLINT1-206ENST00000523094 WDR75Q8IWA0 830 aaKnown RBP12.8□□□□□ -0.36
CLINT1-206ENST00000523094 GALNT4Q8N4A0 578 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 USP6NLQ92738 828 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 GPRASP2Q96D09 838 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 HIC2Q96JB3 615 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 ZNF778Q96MU6 729 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 PAK5Q9P286 719 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 USP18Q9UMW8 372 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 DNAJC16Q9Y2G8 782 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 HMX2A2RU54 273 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 LYPLA1O75608 230 aaPredicted RBP12.8□□□□□ -0.36
CLINT1-206ENST00000523094 KLHL2O95198 593 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 CCND2P30279 289 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 TNFSF9P41273 254 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 COPAP53621 1224 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 SH3BGRP55822 239 aaPredicted RBP12.8□□□□□ -0.36
CLINT1-206ENST00000523094 C1orf228Q6PIY5 440 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 DENND5BQ6ZUT9 1274 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 LRGUKQ96M69 825 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 MMP19Q99542 508 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 SIKE1Q9BRV8 207 aa12.8□□□□□ -0.36
CLINT1-206ENST00000523094 ITM2AO43736 263 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 PENKP01210 267 aaPredicted RBP12.79□□□□□ -0.36
CLINT1-206ENST00000523094 DPY19L2Q6NUT2 758 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 XYLT1Q86Y38 959 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 CCDC33Q8N5R6 958 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 JADE3Q92613 823 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 FRMD8Q9BZ67 464 aaPredicted RBP12.79□□□□□ -0.36
CLINT1-206ENST00000523094 Q9H521 79 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 USP29Q9HBJ7 922 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 LZTS1Q9Y250 596 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 SMIM31A0A1B0GVY4 71 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 IRF6O14896 467 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 KCNN4O15554 427 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 L1CAMP32004 1257 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 NAMPTP43490 491 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 CHN2P52757 468 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 DGKZQ13574 1117 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 FASTKD1Q53R41 847 aaKnown RBP12.79□□□□□ -0.36
CLINT1-206ENST00000523094 MAP3K21Q5TCX8 1036 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 PGM2L1Q6PCE3 622 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 UNC5AQ6ZN44 842 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 VSIG10LQ86VR7 867 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 WDR49Q8IV35 697 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 ADGRF2Q8IZF7 708 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 CCNYQ8ND76 341 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 PIWIL2Q8TC59 973 aaKnown RBP12.79□□□□□ -0.36
CLINT1-206ENST00000523094 TMEM39BQ9GZU3 492 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 CDH22Q9UJ99 828 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 ITGA11Q9UKX5 1188 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 APOBEC2Q9Y235 224 aaKnown RBP12.79□□□□□ -0.36
CLINT1-206ENST00000523094 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.79□□□□□ -0.36
CLINT1-206ENST00000523094 CSDE1O75534 798 aaKnown RBP12.79□□□□□ -0.36
CLINT1-206ENST00000523094 OR6B1O95007 311 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 PROCP04070 461 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 ERBB2P04626 1255 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 SETSIPP0DME0 302 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 AP3M2P53677 418 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 HIRAP54198 1017 aaPredicted RBP12.79□□□□□ -0.36
CLINT1-206ENST00000523094 ANKRD20A4Q4UJ75 823 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 BRSK2Q8IWQ3 736 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 ACTRT2Q8TDY3 377 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 PEBP4Q96S96 227 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 CPXM1Q96SM3 734 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 PORCNQ9H237 461 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 JPH1Q9HDC5 661 aaPredicted RBP12.79□□□□□ -0.36
CLINT1-206ENST00000523094 ETNK2Q9NVF9 386 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 SCAF8Q9UPN6 1271 aaKnown RBP12.79□□□□□ -0.36
CLINT1-206ENST00000523094 CCDC78A2IDD5 438 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 SLC15A5A6NIM6 579 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 WDR46O15213 610 aaKnown RBP12.79□□□□□ -0.36
CLINT1-206ENST00000523094 SIN3BO75182 1162 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 RAG1P15918 1043 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 CDH6P55285 790 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 ACTR2P61160 394 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 XKR3Q5GH77 459 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 FBXL19Q6PCT2 694 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 TRMT10BQ6PF06 316 aaKnown RBP12.79□□□□□ -0.36
CLINT1-206ENST00000523094 UGT2A3Q6UWM9 527 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 RSPH3Q86UC2 560 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 LCA5Q86VQ0 697 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 CXorf38Q8TB03 319 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 ITFG2Q969R8 447 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 SDCBP2Q9H190 292 aa12.79□□□□□ -0.36
CLINT1-206ENST00000523094 SF3B1O75533 1304 aaKnown RBP eCLIP12.78□□□□□ -0.362e-6■■■■■ 137.6
CLINT1-206ENST00000523094 NR3C2P08235 984 aa12.78□□□□□ -0.36
CLINT1-206ENST00000523094 RPL26P61254 145 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms