RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 PECAM1P16284 738 aaPredicted RBP16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 ATF6P18850 670 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 CA8P35219 290 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 COL4A4P53420 1690 aaPredicted RBP16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 HLTFQ14527 1009 aaKnown RBP eCLIP16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 MAP9Q49MG5 647 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 HERC6Q8IVU3 1022 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 ACTL9Q8TC94 416 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 TRIM62Q9BVG3 475 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 FBXO44Q9H4M3 255 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 RRN3Q9NYV6 651 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 SNX24Q9Y343 169 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 INSL6Q9Y581 213 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 SLC4A7Q9Y6M7 1214 aa16.06■□□□□ 0.16
CTNNA1-236ENST00000522792 LCHNA4D1U4 455 aa16.05■□□□□ 0.16
CTNNA1-236ENST00000522792 FGF18O76093 207 aa16.05■□□□□ 0.16
CTNNA1-236ENST00000522792 LINC00271P0C7V0 271 aa16.05■□□□□ 0.16
CTNNA1-236ENST00000522792 YWHAQP27348 245 aa16.05■□□□□ 0.16
CTNNA1-236ENST00000522792 PPM1AP35813 382 aa16.05■□□□□ 0.16
CTNNA1-236ENST00000522792 TNNT3P45378 269 aaPredicted RBP16.05■□□□□ 0.16
CTNNA1-236ENST00000522792 RPL10AP62906 217 aaKnown RBP16.05■□□□□ 0.16
CTNNA1-236ENST00000522792 BYSLQ13895 437 aaKnown RBP16.05■□□□□ 0.16
CTNNA1-236ENST00000522792 TRIP13Q15645 432 aaPredicted RBP16.05■□□□□ 0.16
CTNNA1-236ENST00000522792 C1orf228Q6PIY5 440 aa16.05■□□□□ 0.16
CTNNA1-236ENST00000522792 PQLC3Q8N755 202 aa16.05■□□□□ 0.16
CTNNA1-236ENST00000522792 ATL2Q8NHH9 583 aa16.05■□□□□ 0.16
CTNNA1-236ENST00000522792 PCDH19Q8TAB3 1148 aa16.05■□□□□ 0.16
CTNNA1-236ENST00000522792 FAM71BQ8TC56 605 aa16.05■□□□□ 0.16
CTNNA1-236ENST00000522792 FBXO32Q969P5 355 aa16.05■□□□□ 0.16
CTNNA1-236ENST00000522792 PGAP3Q96FM1 320 aaPredicted RBP16.05■□□□□ 0.16
CTNNA1-236ENST00000522792 ZNF670Q9BS34 389 aa16.05■□□□□ 0.16
CTNNA1-236ENST00000522792 SFMBT1Q9UHJ3 866 aa16.05■□□□□ 0.16
CTNNA1-236ENST00000522792 I6L893 689 aaPredicted RBP16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 SEC24AO95486 1093 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 GOT1P17174 413 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 TFDP2Q14188 446 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 EFHC2Q5JST6 749 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 DUPD1Q68J44 220 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 PRUNE1Q86TP1 453 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 AENQ8WTP8 325 aaKnown RBP16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 GRK7Q8WTQ7 553 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 HERVK_113Q902F9 699 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 CASP10Q92851 521 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 SLCO2A1Q92959 643 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 SPATA17Q96L03 361 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 NEUROG2Q9H2A3 272 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 C10orf88Q9H8K7 445 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 MAGED2Q9UNF1 606 aaPredicted RBP16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 ZNF148Q9UQR1 794 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 PLXNA3P51805 1871 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 SLC38A8A6NNN8 435 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 APOL1O14791 398 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 MSI1O43347 362 aaKnown RBP16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 TLL1O43897 1013 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 CSPG5O95196 566 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 RTN3O95197 1032 aaPredicted RBP16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 F9P00740 461 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 FAM153BP0C7A2 387 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 ATP2A2P16615 1042 aaKnown RBP16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 ADRA1BP35368 520 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 VPS41P49754 854 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 VCPP55072 806 aaKnown RBP16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 TAF10Q12962 218 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 FAM153CQ494X1 144 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 GLIPR1L2Q4G1C9 344 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 B4GALNT4Q76KP1 1039 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 SND1Q7KZF4 910 aaKnown RBP eCLIP16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 BEND5Q7L4P6 421 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 GSTA5Q7RTV2 222 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 MON1AQ86VX9 555 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 RNF139Q8WU17 664 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 RNF34Q969K3 372 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 CSPG4P5Q96PW8 444 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 WDCPQ9H6R7 721 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 CYP4F11Q9HBI6 524 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 IL37Q9NZH6 218 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 CWC15Q9P013 229 aaKnown RBP16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 AFF4Q9UHB7 1163 aaKnown RBP16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 FAM153AQ9UHL3 310 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 FBXW11Q9UKB1 542 aa16.04■□□□□ 0.16
CTNNA1-236ENST00000522792 APOC4-APOC2K7ER74 178 aa16.03■□□□□ 0.16
CTNNA1-236ENST00000522792 CREB3O43889 395 aa16.03■□□□□ 0.16
CTNNA1-236ENST00000522792 MAP3K6O95382 1288 aa16.03■□□□□ 0.16
CTNNA1-236ENST00000522792 GAS8O95995 478 aa16.03■□□□□ 0.16
CTNNA1-236ENST00000522792 APOC2P02655 101 aa16.03■□□□□ 0.16
CTNNA1-236ENST00000522792 ECHS1P30084 290 aa16.03■□□□□ 0.16
CTNNA1-236ENST00000522792 RPL21P46778 160 aaKnown RBP16.03■□□□□ 0.16
CTNNA1-236ENST00000522792 CXCR3P49682 368 aa16.03■□□□□ 0.16
CTNNA1-236ENST00000522792 CUL1Q13616 776 aa16.03■□□□□ 0.16
CTNNA1-236ENST00000522792 KLHL23Q8NBE8 558 aa16.03■□□□□ 0.16
CTNNA1-236ENST00000522792 TTC13Q8NBP0 860 aa16.03■□□□□ 0.16
CTNNA1-236ENST00000522792 ZNF461Q8TAF7 563 aa16.03■□□□□ 0.16
CTNNA1-236ENST00000522792 SLC35B2Q8TB61 432 aa16.03■□□□□ 0.16
CTNNA1-236ENST00000522792 SEC14L1Q92503 715 aa16.03■□□□□ 0.16
CTNNA1-236ENST00000522792 FAF2Q96CS3 445 aa16.03■□□□□ 0.16
CTNNA1-236ENST00000522792 SLC9A7Q96T83 725 aa16.03■□□□□ 0.16
CTNNA1-236ENST00000522792 TKTL2Q9H0I9 626 aa16.03■□□□□ 0.16
CTNNA1-236ENST00000522792 MRPL17Q9NRX2 175 aaKnown RBP16.03■□□□□ 0.16
CTNNA1-236ENST00000522792 FAM114A2Q9NRY5 505 aa16.03■□□□□ 0.16
CTNNA1-236ENST00000522792 ASIC3Q9UHC3 531 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms