RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 MARCH2Q9P0N8 246 aa10.75□□□□□ -0.69
CTNNA1-235ENST00000522730 HESX1Q9UBX0 185 aa10.75□□□□□ -0.69
CTNNA1-235ENST00000522730 MAN1B1Q9UKM7 699 aa10.75□□□□□ -0.69
CTNNA1-235ENST00000522730 PCDHB4Q9Y5E5 795 aa10.75□□□□□ -0.69
CTNNA1-235ENST00000522730 RAD54BQ9Y620 910 aa10.75□□□□□ -0.69
CTNNA1-235ENST00000522730 HELZP42694 1942 aaKnown RBP10.75□□□□□ -0.69
CTNNA1-235ENST00000522730 WASH3PC4AMC7 463 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 PRRT4C9JH25 899 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 SLC16A3O15427 465 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 TSPAN3O60637 253 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 ZBED1O96006 694 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 CALCAP01258 141 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 KLKB1P03952 638 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 LCP1P13796 627 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 CORO1AP31146 461 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 STX17P56962 302 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 YWHAEP62258 255 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 IRX4P78413 519 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 COG7P83436 770 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 LRRC63Q05C16 580 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 PDE4CQ08493 712 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 BYSLQ13895 437 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 UAP1L1Q3KQV9 507 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 HSF5Q4G112 596 aaPredicted RBP10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 PMS2CLQ68D20 193 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 KLHDC10Q6PID8 442 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 ARHGAP18Q8N392 663 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 RNF139Q8WU17 664 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 EDEM1Q92611 657 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 TIGD1Q96MW7 591 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 CNTNAP3BQ96NU0 1288 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 CDK5RAP1Q96SZ6 601 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 EDEM2Q9BV94 578 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 CNTNAP3Q9BZ76 1288 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 ULBP1Q9BZM6 244 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 SLC6A17Q9H1V8 727 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 CACNA2D2Q9NY47 1150 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 CLIC5Q9NZA1 410 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 MBD1Q9UIS9 605 aaPredicted RBP10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 TSPAN16Q9UKR8 245 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 HCN2Q9UL51 889 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 STRIP2Q9ULQ0 834 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 USP3Q9Y6I4 520 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 ACACBO00763 2458 aa10.74□□□□□ -0.69
CTNNA1-235ENST00000522730 CACNG3O60359 315 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 GADD45BO75293 160 aaPredicted RBP10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 CYBBP04839 570 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 CISD3P0C7P0 127 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 VDRP11473 427 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 GABRG2P18507 467 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 P2RY2P41231 377 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 PTGER3P43115 390 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 MAPK8P45983 427 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 FMO5P49326 533 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 RGS7P49802 495 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 RPL6Q02878 288 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 ADIGQ0VDE8 80 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 MAP7D1Q3KQU3 841 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 N4BP2L1Q5TBK1 243 aaPredicted RBP10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 ARHGAP17Q68EM7 881 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 KIAA1211LQ6NV74 962 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 TMEM270Q6UE05 265 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 Q6ZNB5 142 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 RRAGAQ7L523 313 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 SIX6OS1Q8N1H7 587 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 PPM1KQ8N3J5 372 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 OLIG1Q8TAK6 271 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 KCNV2Q8TDN2 545 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 IPO4Q8TEX9 1081 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 DDI1Q8WTU0 396 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 NELFBQ8WX92 580 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 DDX1Q92499 740 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 SLC35C1Q96A29 364 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 DHTKD1Q96HY7 919 aaPredicted RBP10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 FAXDC2Q96IV6 333 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 NT5C1BQ96P26 610 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 GTPBP4Q9BZE4 634 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 UBXN6Q9BZV1 441 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 DCLK3Q9C098 648 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 METTL14Q9HCE5 456 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 SFMBT1Q9UHJ3 866 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 AGO1Q9UL18 857 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 CYP8B1Q9UNU6 501 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 CTNND2Q9UQB3 1225 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 ZNF510Q9Y2H8 683 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 EPG5Q9HCE0 2579 aa10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 ATXN2Q99700 1313 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 MYO18AQ92614 2054 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-235ENST00000522730 XPO1O14980 1071 aaKnown RBP10.72□□□□□ -0.69
CTNNA1-235ENST00000522730 CFIP05156 583 aa10.72□□□□□ -0.69
CTNNA1-235ENST00000522730 ADRB1P08588 477 aa10.72□□□□□ -0.69
CTNNA1-235ENST00000522730 ITPKAP23677 461 aa10.72□□□□□ -0.69
CTNNA1-235ENST00000522730 CHKAP35790 457 aa10.72□□□□□ -0.69
CTNNA1-235ENST00000522730 LIMK1P53667 647 aa10.72□□□□□ -0.69
CTNNA1-235ENST00000522730 BCAT1P54687 386 aa10.72□□□□□ -0.69
CTNNA1-235ENST00000522730 MCCD1P59942 119 aaPredicted RBP10.72□□□□□ -0.69
CTNNA1-235ENST00000522730 CETN1Q12798 172 aa10.72□□□□□ -0.69
CTNNA1-235ENST00000522730 COBLL1Q53SF7 1204 aa10.72□□□□□ -0.69
CTNNA1-235ENST00000522730 RAB41Q5JT25 222 aa10.72□□□□□ -0.69
CTNNA1-235ENST00000522730 BSPRYQ5W0U4 402 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms