RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	FAM163A	Q96GL9	167 aa	Predicted RBP	10.65	□□□□□ -0.7
TCF7-223	ENST00000522653	AGPAT1	Q99943	283 aa		10.65	□□□□□ -0.7
TCF7-223	ENST00000522653	VPS11	Q9H270	941 aa		10.65	□□□□□ -0.7
TCF7-223	ENST00000522653	POLD4	Q9HCU8	107 aa		10.65	□□□□□ -0.7
TCF7-223	ENST00000522653	WWOX	Q9NZC7	414 aa		10.65	□□□□□ -0.7
TCF7-223	ENST00000522653	APOBEC2	Q9Y235	224 aa	Known RBP	10.65	□□□□□ -0.7
TCF7-223	ENST00000522653	CDY2A	Q9Y6F7	541 aa		10.65	□□□□□ -0.7
TCF7-223	ENST00000522653	SYCE1L	A8MT33	242 aa		10.65	□□□□□ -0.71
TCF7-223	ENST00000522653	CDC25A	P30304	524 aa		10.65	□□□□□ -0.71
TCF7-223	ENST00000522653	CARS	P49589	748 aa	Known RBP	10.65	□□□□□ -0.71
TCF7-223	ENST00000522653	GPM6B	Q13491	265 aa		10.65	□□□□□ -0.71
TCF7-223	ENST00000522653	LRRN4CL	Q8ND94	238 aa		10.65	□□□□□ -0.71
TCF7-223	ENST00000522653	TMC2	Q8TDI7	906 aa		10.65	□□□□□ -0.71
TCF7-223	ENST00000522653	SYTL5	Q8TDW5	730 aa	Predicted RBP	10.65	□□□□□ -0.71
TCF7-223	ENST00000522653	C2orf15	Q8WU43	125 aa	Known RBP	10.65	□□□□□ -0.71
TCF7-223	ENST00000522653	CCDC126	Q96EE4	140 aa		10.65	□□□□□ -0.71
TCF7-223	ENST00000522653	CORO1B	Q9BR76	489 aa		10.65	□□□□□ -0.71
TCF7-223	ENST00000522653	CARD9	Q9H257	536 aa		10.65	□□□□□ -0.71
TCF7-223	ENST00000522653	GAN	Q9H2C0	597 aa		10.65	□□□□□ -0.71
TCF7-223	ENST00000522653	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.65	□□□□□ -0.71
TCF7-223	ENST00000522653	DNAJC11	Q9NVH1	559 aa		10.65	□□□□□ -0.71
TCF7-223	ENST00000522653	MRPS33	Q9Y291	106 aa	Known RBP	10.65	□□□□□ -0.71
TCF7-223	ENST00000522653	LGR5	O75473	907 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	LGALS2	P05162	132 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	DDX6	P26196	483 aa	Known RBP eCLIP	10.64	□□□□□ -0.71	5e-6	■■■■■ 46.6
TCF7-223	ENST00000522653	PIK3CG	P48736	1102 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	PLPPR4	Q7Z2D5	763 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	COLGALT2	Q8IYK4	626 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	KIAA1143	Q96AT1	154 aa	Predicted RBP	10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	VPS33A	Q96AX1	596 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	NECTIN4	Q96NY8	510 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	PCMTD2	Q9NV79	361 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	KLHL28	Q9NXS3	571 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	DDX43	Q9NXZ2	648 aa	Known RBP	10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	CACNA2D2	Q9NY47	1150 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	TUBGCP4	Q9UGJ1	667 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	DCTN4	Q9UJW0	460 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	DEPDC5	O75140	1603 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	AHCYL1	O43865	530 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	CHRM3	P20309	590 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	ACOT2	P49753	483 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	ERP27	Q96DN0	273 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	MAML3	Q96JK9	1138 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	ZNF556	Q9HAH1	456 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	KLK14	Q9P0G3	267 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	VPS4B	O75351	444 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	PTPN2	P17706	415 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	EPHB2	P29323	1055 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	SPR	P35270	261 aa	Predicted RBP	10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	CASR	P41180	1078 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	CLCN3	P51790	818 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	BNC1	Q01954	994 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	MLLT1	Q03111	559 aa	Predicted RBP	10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	BCL2L1	Q07817	233 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	FBXO46	Q6PJ61	603 aa	Predicted RBP	10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	SNCAIP	Q9Y6H5	919 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	FAM170A	A1A519	330 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	LSM8	O95777	96 aa	Known RBP	10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	GYPC	P04921	128 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	GPD2	P43304	727 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	NEK2	P51955	445 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	ERVK-21	P61565	698 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	TMPRSS15	P98073	1019 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	NDUFA9	Q16795	377 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	CELF3	Q5SZQ8	465 aa	Known RBP	10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	MIB1	Q86YT6	1006 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	DTX3L	Q8TDB6	740 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	AGO4	Q9HCK5	861 aa	Known RBP	10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	GJB4	Q9NTQ9	266 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	AMACR	Q9UHK6	382 aa		10.64	□□□□□ -0.71
TCF7-223	ENST00000522653	FOXN1	O15353	648 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	ZNF286B	P0CG31	522 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	PIM1	P11309	404 aa	Predicted RBP	10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	NCF2	P19878	526 aa	Predicted RBP	10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	LAMTOR4	Q0VGL1	99 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	TRIP4	Q15650	581 aa	Predicted RBP	10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	DNAL1	Q4LDG9	190 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	ZNF513	Q8N8E2	541 aa	Predicted RBP	10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	THAP11	Q96EK4	314 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	SLC9A7	Q96T83	725 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	SMYD3	Q9H7B4	428 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	ABCC13	Q9NSE7	274 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	APEX2	Q9UBZ4	518 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	TRIM10	Q9UDY6	481 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	POLB	P06746	335 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	SKOR1	P84550	965 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	PTK7	Q13308	1070 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	TRIP13	Q15645	432 aa	Predicted RBP	10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	ZNHIT3	Q15649	155 aa	Predicted RBP	10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	LRRC8E	Q6NSJ5	796 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	LRRC49	Q8IUZ0	686 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	TMCO5A	Q8N6Q1	288 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	SPPL2B	Q8TCT7	592 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	CAVIN3	Q969G5	261 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	C18orf25	Q96B23	403 aa	Predicted RBP	10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	RBBP8	Q99708	897 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	SAYSD1	Q9NPB0	183 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	EVPLL	A8MZ36	301 aa		10.63	□□□□□ -0.71
TCF7-223	ENST00000522653	UBTFL6	P0CB48	400 aa	Predicted RBP	10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms