RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 IRGCQ6NXR0 463 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 ADGRA2Q96PE1 1338 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 ZBED2Q9BTP6 218 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 UBE2OQ9C0C9 1292 aaKnown RBP14.22□□□□□ -0.13
SYNPO-205ENST00000522122 IARS2Q9NSE4 1012 aaKnown RBP14.22□□□□□ -0.13
SYNPO-205ENST00000522122 TBC1D23Q9NUY8 699 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 MOSPD1Q9UJG1 213 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 AJAP1Q9UKB5 411 aaPredicted RBP14.22□□□□□ -0.13
SYNPO-205ENST00000522122 LRCH1Q9Y2L9 728 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 A0A087WZ62 844 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 KBTBD13C9JR72 458 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 LIASO43766 372 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 JCHAINP01591 159 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 TGFB3P10600 412 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 GCLCP48506 637 aaPredicted RBP14.22□□□□□ -0.13
SYNPO-205ENST00000522122 PCYT1AP49585 367 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 CDK16Q00536 496 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 BRSK2Q8IWQ3 736 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 ALLCQ8N6M5 410 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 COLGALT1Q8NBJ5 622 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.22□□□□□ -0.13
SYNPO-205ENST00000522122 DNERQ8NFT8 737 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 JADE3Q92613 823 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 FDXACB1Q9BRP7 624 aaPredicted RBP14.22□□□□□ -0.13
SYNPO-205ENST00000522122 BARX2Q9UMQ3 279 aaPredicted RBP14.22□□□□□ -0.13
SYNPO-205ENST00000522122 SOX13Q9UN79 622 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 E9PBE3 544 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 KLHL41O60662 606 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 SOAT2O75908 522 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 TFE3P19532 575 aaPredicted RBP14.22□□□□□ -0.13
SYNPO-205ENST00000522122 AVPR1AP37288 418 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 TWF1Q12792 350 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 MRNIPQ6NTE8 343 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 TUBGCP3Q96CW5 907 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 OXNAD1Q96HP4 312 aaPredicted RBP14.22□□□□□ -0.13
SYNPO-205ENST00000522122 CNBD2Q96M20 576 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 USP20Q9Y2K6 914 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 DEAF1O75398 565 aaPredicted RBP14.21□□□□□ -0.13
SYNPO-205ENST00000522122 EIF4BP23588 611 aaKnown RBP14.21□□□□□ -0.13
SYNPO-205ENST00000522122 NCKAP1LP55160 1127 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 TTC33Q6PID6 262 aaPredicted RBP14.21□□□□□ -0.13
SYNPO-205ENST00000522122 ELMSAN1Q6PJG2 1045 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 ZDHHC24Q6UX98 284 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.21□□□□□ -0.13
SYNPO-205ENST00000522122 SLITRK1Q96PX8 696 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 TSPAN16Q9UKR8 245 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 DRG1Q9Y295 367 aaKnown RBP14.21□□□□□ -0.13
SYNPO-205ENST00000522122 MYH3P11055 1940 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 APOA1P02647 267 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 VTNP04004 478 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 ATP5BP06576 529 aaKnown RBP14.21□□□□□ -0.13
SYNPO-205ENST00000522122 PGK2P07205 417 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 SLC2A3P11169 496 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 TM4SF1P30408 202 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 MAP3K10Q02779 954 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 IZUMO2Q6UXV1 221 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 SRPK1Q96SB4 655 aaKnown RBP14.21□□□□□ -0.13
SYNPO-205ENST00000522122 NCKIPSDQ9NZQ3 722 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 PRKAG2Q9UGJ0 569 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 LGALS13Q9UHV8 139 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 CLASP2O75122 1294 aaKnown RBP14.21□□□□□ -0.13
SYNPO-205ENST00000522122 B3GAT3O94766 335 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 MAMLD1Q13495 774 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 CYP1B1Q16678 543 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 TAGAPQ8N103 731 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 SH3KBP1Q96B97 665 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 LRMDAQ9H2I8 198 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 ACP6Q9NPH0 428 aa14.21□□□□□ -0.13
SYNPO-205ENST00000522122 POU4F1Q01851 419 aa14.21□□□□□ -0.14
SYNPO-205ENST00000522122 MGAT5BQ3V5L5 792 aa14.21□□□□□ -0.14
SYNPO-205ENST00000522122 NBPF12Q5TAG4 269 aaPredicted RBP14.21□□□□□ -0.14
SYNPO-205ENST00000522122 DCAF12L1Q5VU92 463 aa14.21□□□□□ -0.14
SYNPO-205ENST00000522122 SNX30Q5VWJ9 437 aa14.21□□□□□ -0.14
SYNPO-205ENST00000522122 DDI1Q8WTU0 396 aa14.21□□□□□ -0.14
SYNPO-205ENST00000522122 SEPT5Q99719 369 aaPredicted RBP14.21□□□□□ -0.14
SYNPO-205ENST00000522122 FAM198AQ9UFP1 575 aa14.21□□□□□ -0.14
SYNPO-205ENST00000522122 ALBP02768 609 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 ADRA1DP25100 572 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 GSCP56915 257 aaPredicted RBP14.2□□□□□ -0.14
SYNPO-205ENST00000522122 CXCL9Q07325 125 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 BST2Q10589 180 aaKnown RBP14.2□□□□□ -0.14
SYNPO-205ENST00000522122 RRM2BQ7LG56 351 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 CERS5Q8N5B7 392 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 CPB2Q96IY4 423 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 ZBTB45Q96K62 511 aaPredicted RBP14.2□□□□□ -0.14
SYNPO-205ENST00000522122 MUC3BQ9H195 1237 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 ZNF229Q9UJW7 825 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 CORO1CQ9ULV4 474 aaPredicted RBP14.2□□□□□ -0.14
SYNPO-205ENST00000522122 VPS9D1Q9Y2B5 631 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 F8VP50 259 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 CYB561D2O14569 222 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 CSDE1O75534 798 aaKnown RBP14.2□□□□□ -0.14
SYNPO-205ENST00000522122 FKBP9O95302 570 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 GJB6O95452 261 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 N4BP2L1Q5TBK1 243 aaPredicted RBP14.2□□□□□ -0.14
SYNPO-205ENST00000522122 PDPK2PQ6A1A2 396 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 FKBP9P1Q75LS8 142 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 FBXO16Q8IX29 292 aaPredicted RBP14.2□□□□□ -0.14
SYNPO-205ENST00000522122 ZBTB10Q96DT7 871 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 MRIQ9BWK5 157 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms