RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 CDC25CP30307 473 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 ALDH1A3P47895 512 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 TUFMP49411 452 aaKnown RBP6.49□□□□□ -1.37
PABPC1-207ENST00000518716 LILRA4P59901 499 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 SIM1P81133 766 aaPredicted RBP6.49□□□□□ -1.37
PABPC1-207ENST00000518716 SCAPQ12770 1279 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 LMAN2Q12907 356 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 MAPK7Q13164 816 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 PDGFRLQ15198 375 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 COL28A1Q2UY09 1125 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 ZNF568Q3ZCX4 644 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 USP39Q53GS9 565 aaKnown RBP6.49□□□□□ -1.37
PABPC1-207ENST00000518716 ARHGAP15Q53QZ3 475 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 SPDYCQ5MJ68 293 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 OVOS1Q6IE37 1185 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 MPZL3Q6UWV2 235 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 CCNI2Q6ZMN8 369 aaPredicted RBP6.49□□□□□ -1.37
PABPC1-207ENST00000518716 RINLQ6ZS11 566 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 ITIH5Q86UX2 942 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 LRRTM3Q86VH5 581 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 MON1AQ86VX9 555 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 CHCHD4Q8N4Q1 142 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 MDGA1Q8NFP4 955 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 CCDC43Q96MW1 224 aaKnown RBP6.49□□□□□ -1.37
PABPC1-207ENST00000518716 MRPL4Q9BYD3 311 aaKnown RBP6.49□□□□□ -1.37
PABPC1-207ENST00000518716 ZCWPW1Q9H0M4 648 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 ECT2Q9H8V3 914 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 CAPN10Q9HC96 672 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 TDP1Q9NUW8 608 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 MBD1Q9UIS9 605 aaPredicted RBP6.49□□□□□ -1.37
PABPC1-207ENST00000518716 DCTN4Q9UJW0 460 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 PILRBQ9UKJ0 227 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 INVSQ9Y283 1065 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 PHLPP2Q6ZVD8 1323 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 SCN1AP35498 2009 aa6.49□□□□□ -1.37
PABPC1-207ENST00000518716 PLXND1Q9Y4D7 1925 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 OBSL1O75147 1896 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 ARHGEF35A5YM69 484 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 BTBD18B2RXH4 712 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 PIRO00625 290 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 PPEF2O14830 753 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 EPB41L2O43491 1005 aaKnown RBP6.48□□□□□ -1.37
PABPC1-207ENST00000518716 FZD6O60353 706 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 PFKFB2O60825 505 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 TADA3O75528 432 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 TOM1L1O75674 476 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 GJB3O75712 270 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 RPLP1P05386 114 aaKnown RBP6.48□□□□□ -1.37
PABPC1-207ENST00000518716 HAPLN1P10915 354 aaPredicted RBP6.48□□□□□ -1.37
PABPC1-207ENST00000518716 EDN3P14138 238 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 TCF3P15923 654 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 ENGP17813 658 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 XBP1P17861 261 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 DDX6P26196 483 aaKnown RBP eCLIP6.48□□□□□ -1.37
PABPC1-207ENST00000518716 U2AF2P26368 475 aaKnown RBP eCLIP6.48□□□□□ -1.37
PABPC1-207ENST00000518716 HOXD12P35452 270 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 KRT2P35908 639 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 OPRD1P41143 372 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 P2RY2P41231 377 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 PTGER3P43115 390 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 DGKEP52429 567 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 PEX3P56589 373 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 AMPD2Q01433 879 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 MCL1Q07820 350 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 PCDH1Q08174 1060 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 STK3Q13188 491 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 ZNF77Q15935 545 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 CRY1Q16526 586 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 UAP1L1Q3KQV9 507 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 SEZ6Q53EL9 994 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 TRIM61Q5EBN2 209 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 HP1BP3Q5SSJ5 553 aaPredicted RBP6.48□□□□□ -1.37
PABPC1-207ENST00000518716 CPLX2Q6PUV4 134 aaKnown RBP6.48□□□□□ -1.37
PABPC1-207ENST00000518716 C19orf48Q6RUI8 117 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 C1orf186Q6ZWK4 172 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 SYT12Q8IV01 421 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 FRMD1Q8N878 549 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 C4orf32Q8N8J7 132 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 TSTD1Q8NFU3 115 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 OSCP1Q8WVF1 389 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 ADAMTS14Q8WXS8 1223 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 PIGKQ92643 395 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 CD101Q93033 1021 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 IFT74Q96LB3 600 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 BHMT2Q9H2M3 363 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 SLC32A1Q9H598 525 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 KIF9Q9HAQ2 790 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 IGSF5Q9NSI5 407 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 GCNT4Q9P109 453 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 DKK4Q9UBT3 224 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 KALRNO60229 2985 aa6.48□□□□□ -1.37
PABPC1-207ENST00000518716 ZNF638Q14966 1978 aaKnown RBP6.48□□□□□ -1.37
PABPC1-207ENST00000518716 COL6A6A6NMZ7 2263 aa6.47□□□□□ -1.37
PABPC1-207ENST00000518716 MYOFQ9NZM1 2061 aa6.47□□□□□ -1.37
PABPC1-207ENST00000518716 ANO9A1A5B4 782 aa6.47□□□□□ -1.37
PABPC1-207ENST00000518716 CYSRT1A8MQ03 144 aa6.47□□□□□ -1.37
PABPC1-207ENST00000518716 CDKL5O76039 1030 aa6.47□□□□□ -1.37
PABPC1-207ENST00000518716 PDGFAP04085 211 aa6.47□□□□□ -1.37
PABPC1-207ENST00000518716 GLI1P08151 1106 aa6.47□□□□□ -1.37
PABPC1-207ENST00000518716 CXCL8P10145 99 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms