RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 CDKN2AP42771 156 aaKnown RBP3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 THBS3P49746 956 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 WDR5P61964 334 aaKnown RBP3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 MTA1Q13330 715 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 DNASE1L3Q13609 305 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 CNGA3Q16281 694 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 MANEALQ5VSG8 457 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 NXNQ6DKJ4 435 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 C9orf47Q6ZRZ4 202 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SESTD1Q86VW0 696 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 ADGRF4Q8IZF3 695 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 FAM177A1Q8N128 213 aaPredicted RBP3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 MAGEB6Q8N7X4 407 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 ACRBPQ8NEB7 543 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 TRMT61AQ96FX7 289 aaKnown RBP3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 FAM227BQ96M60 508 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 FCRL5Q96RD9 977 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 TUBB6Q9BUF5 446 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 HIPK2Q9H2X6 1198 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 DECR2Q9NUI1 292 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 RGS17Q9UGC6 210 aaPredicted RBP3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 IPO11Q9UI26 975 aaKnown RBP3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 CAPN11Q9UMQ6 739 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 VPS4AQ9UN37 437 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SNX13Q9Y5W8 968 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 IGLV5-39A0A0G2JS06 123 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 F8W810 466 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 TPP1O14773 563 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 CCNT2O60583 730 aaKnown RBP3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 PRAMEF2O60811 474 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SCGB1D2O95969 90 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 ZBED1O96006 694 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 IL1R1P14778 569 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 ALDH7A1P49419 539 aaKnown RBP3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 VPS41P49754 854 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 HTR6P50406 440 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 COPAP53621 1224 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 B4GALNT1Q00973 533 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 NFE2Q16621 373 aaPredicted RBP3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 ZNF549Q6P9A3 640 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 MBD3L2Q8NHZ7 208 aaPredicted RBP3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 ABHD5Q8WTS1 349 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 PMM1Q92871 262 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SLC25A28Q96A46 364 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 KAZALD1Q96I82 304 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 STRBPQ96SI9 672 aaKnown RBP3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SLC25A32Q9H2D1 315 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SEMA4BQ9NPR2 832 aaPredicted RBP3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 HEYLQ9NQ87 328 aaPredicted RBP3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 VPS45Q9NRW7 570 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 TMOD4Q9NZQ9 345 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 COL15A1P39059 1388 aa3.35□□□□□ -1.87
RNU6-1088P-201ENST00000516850 C2CD4BA6NLJ0 364 aa3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 FOXN3O00409 490 aaPredicted RBP3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 THAP12O43422 761 aa3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 COQ9O75208 318 aa3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 HRGP04196 525 aa3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 ANXA2P07355 339 aaKnown RBP3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 RPS6KB1P23443 525 aa3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 PRTGQ2VWP7 1150 aa3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 GFOD2Q3B7J2 385 aa3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 B4GALNT4Q76KP1 1039 aa3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 MEPCEQ7L2J0 689 aaKnown RBP3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 MYO1HQ8N1T3 1032 aa3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SLC44A5Q8NCS7 719 aa3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 CCDC150Q8NCX0 1101 aa3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 KAT2BQ92831 832 aa3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 MSLNLQ96KJ4 702 aa3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SENP7Q9BQF6 1050 aa3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 TM2D2Q9BX73 214 aa3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 NUP62CLQ9H1M0 184 aa3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 MLXIPQ9HAP2 919 aa3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 PNPLA8Q9NP80 782 aa3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 VPS51Q9UID3 782 aa3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 THRAP3Q9Y2W1 955 aaKnown RBP3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SIRT4Q9Y6E7 314 aaPredicted RBP3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 FRMPD2Q68DX3 1309 aaPredicted RBP3.34□□□□□ -1.87
RNU6-1088P-201ENST00000516850 A6NNZ2 444 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 RRHO14718 337 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 PRPF4O43172 522 aaKnown RBP eCLIP3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 TOMM40O96008 361 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 TGFB3P10600 412 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 TFEBP19484 476 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 MMP8P22894 467 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 DUSP1P28562 367 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 BFSP2Q13515 415 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 ERV3-1Q14264 604 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 ACOX1Q15067 660 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 PLEKHG6Q3KR16 790 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 GLE1Q53GS7 698 aaKnown RBP3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 GRHL2Q6ISB3 625 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 RBM44Q6ZP01 1051 aaKnown RBP3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 CHST15Q7LFX5 561 aaPredicted RBP3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 RAVER1Q8IY67 606 aaKnown RBP3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 SUN3Q8TAQ9 357 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 JDP2Q8WYK2 163 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 IQCDQ96DY2 449 aa3.33□□□□□ -1.88
RNU6-1088P-201ENST00000516850 PRR11Q96HE9 360 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms