RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 KLHL8Q9P2G9 620 aaPredicted RBP14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 AURKCQ9UQB9 309 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 LAMB4A4D0S4 1761 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 KLRG2A4D1S0 409 aaPredicted RBP14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 STRNO43815 780 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 NPM3O75607 178 aaKnown RBP14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 PSMC3P17980 439 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 ABCG1P45844 678 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 LRRC8EQ6NSJ5 796 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 CES3Q6UWW8 571 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 TRIM67Q6ZTA4 783 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 CATSPER1Q8NEC5 780 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 ZSCAN18Q8TBC5 510 aaPredicted RBP14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 DENND1AQ8TEH3 1009 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 CEP41Q9BYV8 373 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 UPF3AQ9H1J1 476 aaKnown RBP14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 RPF1Q9H9Y2 349 aaKnown RBP14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 TYROBPO43914 113 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 TMEM63AO94886 807 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 UNGP13051 313 aaPredicted RBP14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 MIPP30301 263 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 PRPSAP1Q14558 356 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 C16orf72Q14CZ0 275 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 ZBTB46Q86UZ6 589 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 CDKL3Q8IVW4 592 aaPredicted RBP14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 C4orf19Q8IY42 314 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 RNF34Q969K3 372 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 PHF12Q96QT6 1004 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 PANX3Q96QZ0 392 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 CDRT15Q96T59 188 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 SYT11Q9BT88 431 aa14.04□□□□□ -0.16
SH3TC1-225ENST00000515682 VWA5AO00534 786 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 MAGEC1O60732 1142 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 KDELR1P24390 212 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 ADSSP30520 456 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 CCNG1P51959 295 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 DPY19L2P1Q6NXN4 242 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 XRRA1Q6P2D8 792 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 TRIM74Q86UV6 250 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 TRIM73Q86UV7 250 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 OR5B17Q8NGF7 314 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 ECM29Q5VYK3 1845 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 OR6B1O95007 311 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 CD48P09326 243 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 FAM58BPP0C7Q3 252 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 RBL1P28749 1068 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 CASP2P42575 452 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 SERPINB8P50452 374 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 EML3Q32P44 896 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 ZFAND2BQ8WV99 257 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 PDCD2LQ9BRP1 358 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 RNPEPQ9H4A4 650 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 MYPNQ86TC9 1320 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 F8W8V4 182 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 CRCPO75575 148 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 ZBTB48P10074 688 aaPredicted RBP14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 RPL5P46777 297 aaKnown RBP14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 ACTR2P61160 394 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 VWA5B1Q5TIE3 1220 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 BNC2Q6ZN30 1099 aaPredicted RBP14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 TSHZ1Q6ZSZ6 1077 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 PTAR1Q7Z6K3 402 aaPredicted RBP14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 SNX32Q86XE0 403 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 TREML1Q86YW5 311 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 RNF149Q8NC42 400 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 SEMA6AQ9H2E6 1030 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 FAM49BQ9NUQ9 324 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 SNX13Q9Y5W8 968 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 CDY2AQ9Y6F7 541 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 CDY1Q9Y6F8 540 aa14.03□□□□□ -0.16
SH3TC1-225ENST00000515682 SMIM31A0A1B0GVY4 71 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 TMEM191CA6NGB0 347 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 GLRA3O75311 464 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 FGFR3P22607 806 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 GTF2A2P52657 109 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 CDH8P55286 799 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 SNX16P57768 344 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 ACTR3P61158 418 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 POU5F1BQ06416 359 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 TATDN1Q6P1N9 297 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 C16orf89Q6UX73 402 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 LPCAT2Q7L5N7 544 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 PID1Q7Z2X4 250 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 SLC44A1Q8WWI5 657 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 CDCA5Q96FF9 252 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 MRPL46Q9H2W6 279 aaKnown RBP14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 PNPOQ9NVS9 261 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 CLUHO75153 1309 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 AKAP10O43572 662 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 APOEP02649 317 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 VGLL4Q14135 290 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 SPDYAQ5MJ70 313 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 RNF135Q8IUD6 432 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 JOSD2Q8TAC2 188 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 CXorf38Q8TB03 319 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 ACSS2Q9NR19 701 aa14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 HBS1LQ9Y450 684 aaKnown RBP14.02□□□□□ -0.16
SH3TC1-225ENST00000515682 ARHGEF37A1IGU5 675 aa14.02□□□□□ -0.17
SH3TC1-225ENST00000515682 TNFAIP8O95379 198 aa14.02□□□□□ -0.17
SH3TC1-225ENST00000515682 SERPINA6P08185 405 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms