RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 THEM5Q8N1Q8 247 aa8.12□□□□□ -1.11
CLDND1-229ENST00000513988 TMEM130Q8N3G9 435 aa8.12□□□□□ -1.11
CLDND1-229ENST00000513988 TEX19Q8NA77 164 aa8.12□□□□□ -1.11
CLDND1-229ENST00000513988 BICD2Q8TD16 824 aa8.12□□□□□ -1.11
CLDND1-229ENST00000513988 XPO6Q96QU8 1125 aaKnown RBP8.12□□□□□ -1.11
CLDND1-229ENST00000513988 TRIM9Q9C026 710 aa8.12□□□□□ -1.11
CLDND1-229ENST00000513988 LHX5Q9H2C1 402 aa8.12□□□□□ -1.11
CLDND1-229ENST00000513988 RUBCNLQ9H714 662 aa8.12□□□□□ -1.11
CLDND1-229ENST00000513988 ERVMER34-1Q9H9K5 563 aa8.12□□□□□ -1.11
CLDND1-229ENST00000513988 PTPRHQ9HD43 1115 aa8.12□□□□□ -1.11
CLDND1-229ENST00000513988 SPHK2Q9NRA0 654 aa8.12□□□□□ -1.11
CLDND1-229ENST00000513988 EVA1BQ9NVM1 165 aa8.12□□□□□ -1.11
CLDND1-229ENST00000513988 RBM28Q9NW13 759 aaKnown RBP8.12□□□□□ -1.11
CLDND1-229ENST00000513988 VAV3Q9UKW4 847 aa8.12□□□□□ -1.11
CLDND1-229ENST00000513988 TAF6LQ9Y6J9 622 aa8.12□□□□□ -1.11
CLDND1-229ENST00000513988 PRR19A6NJB7 356 aa8.11□□□□□ -1.11
CLDND1-229ENST00000513988 NADKO95544 446 aaPredicted RBP8.11□□□□□ -1.11
CLDND1-229ENST00000513988 IGHV4-34P06331 123 aa8.11□□□□□ -1.11
CLDND1-229ENST00000513988 RARGP13631 454 aa8.11□□□□□ -1.11
CLDND1-229ENST00000513988 NXPH1P58417 271 aa8.11□□□□□ -1.11
CLDND1-229ENST00000513988 SLC45A4Q5BKX6 768 aa8.11□□□□□ -1.11
CLDND1-229ENST00000513988 KIAA0895LQ68EN5 471 aa8.11□□□□□ -1.11
CLDND1-229ENST00000513988 SYNE3Q6ZMZ3 975 aa8.11□□□□□ -1.11
CLDND1-229ENST00000513988 RBM44Q6ZP01 1051 aaKnown RBP8.11□□□□□ -1.11
CLDND1-229ENST00000513988 TMEM25Q86YD3 366 aa8.11□□□□□ -1.11
CLDND1-229ENST00000513988 OR4C6Q8NH72 309 aa8.11□□□□□ -1.11
CLDND1-229ENST00000513988 TBCKQ8TEA7 893 aa8.11□□□□□ -1.11
CLDND1-229ENST00000513988 ARRDC3Q96B67 414 aa8.11□□□□□ -1.11
CLDND1-229ENST00000513988 MTA3Q9BTC8 594 aa8.11□□□□□ -1.11
CLDND1-229ENST00000513988 ANKEF1Q9NU02 776 aa8.11□□□□□ -1.11
CLDND1-229ENST00000513988 TRPM5Q9NZQ8 1165 aa8.11□□□□□ -1.11
CLDND1-229ENST00000513988 ACSL6Q9UKU0 697 aa8.11□□□□□ -1.11
CLDND1-229ENST00000513988 ENTPD4Q9Y227 616 aa8.11□□□□□ -1.11
CLDND1-229ENST00000513988 TNFSF13BQ9Y275 285 aa8.11□□□□□ -1.11
CLDND1-229ENST00000513988 PCDHB11Q9Y5F2 797 aa8.11□□□□□ -1.11
CLDND1-229ENST00000513988 CYP3A7-CYP3A51PA0A087WV96 503 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 A0A1W2PR77 199 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 TLR4O00206 839 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 PLD2O14939 933 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 NPC1O15118 1278 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 CACNG3O60359 315 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 CYP11A1P05108 521 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 TGM2P21980 687 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 CYP3A7P24462 503 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 LIFRP42702 1097 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 EFNA5P52803 228 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 CDH8P55286 799 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 NLRP5P59047 1200 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 TESK1Q15569 626 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 NFE2Q16621 373 aaPredicted RBP8.1□□□□□ -1.11
CLDND1-229ENST00000513988 PFKFB3Q16875 520 aaPredicted RBP8.1□□□□□ -1.11
CLDND1-229ENST00000513988 EIF2S3LQ2VIR3 472 aaKnown RBP8.1□□□□□ -1.11
CLDND1-229ENST00000513988 NCAPH2Q6IBW4 605 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 MCPH1Q8NEM0 835 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 ABHD17AQ96GS6 310 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 LURAP1Q96LR2 239 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 SLC12A9Q9BXP2 914 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 RNF38Q9H0F5 515 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 PRDM8Q9NQV8 689 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 SEL1LQ9UBV2 794 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 DDX25Q9UHL0 483 aaKnown RBP8.1□□□□□ -1.11
CLDND1-229ENST00000513988 DSEQ9UL01 958 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.1□□□□□ -1.11
CLDND1-229ENST00000513988 FBN1P35555 2871 aaKnown RBP8.1□□□□□ -1.11
CLDND1-229ENST00000513988 MYH10P35580 1976 aa8.1□□□□□ -1.11
CLDND1-229ENST00000513988 FAM47DPA6NHR8 397 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 TTLL8A6PVC2 850 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 NEDD8-MDP1E9PL57 170 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 FFAR2O15552 330 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 ABL1P00519 1130 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 MCF2P10911 925 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 MBL2P11226 248 aaPredicted RBP8.09□□□□□ -1.11
CLDND1-229ENST00000513988 HARSP12081 509 aaKnown RBP8.09□□□□□ -1.11
CLDND1-229ENST00000513988 CYP2F1P24903 491 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 NAMPTP43490 491 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 TRAPPC10P48553 1259 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 DGKGP49619 791 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 RARRES1P49788 294 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 LILRA4P59901 499 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 MYL7Q01449 175 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 TSPY1Q01534 308 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 SPAG1Q07617 926 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 RTN1Q16799 776 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 PRR7Q8TB68 274 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 IFI44Q8TCB0 444 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 CPT1CQ8TCG5 803 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 BSNDQ8WZ55 320 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 TCTN2Q96GX1 697 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 TCHPQ9BT92 498 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 BBS2Q9BXC9 721 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 SGK2Q9HBY8 427 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 CYLDQ9NQC7 956 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 TMLHEQ9NVH6 421 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 ERRFI1Q9UJM3 462 aaPredicted RBP8.09□□□□□ -1.11
CLDND1-229ENST00000513988 UBQLN1Q9UMX0 589 aaKnown RBP8.09□□□□□ -1.11
CLDND1-229ENST00000513988 FCF1Q9Y324 198 aaKnown RBP8.09□□□□□ -1.11
CLDND1-229ENST00000513988 SH3BP1Q9Y3L3 701 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 CSPG4Q6UVK1 2322 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 DOCK9Q9BZ29 2069 aa8.09□□□□□ -1.11
CLDND1-229ENST00000513988 CKAP5Q14008 2032 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms