RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 TMEM117Q9H0C3 514 aa8.6□□□□□ -1.03
HTT-208ENST00000510626 SARS2Q9NP81 518 aaKnown RBP8.6□□□□□ -1.03
HTT-208ENST00000510626 TMEM216Q9P0N5 145 aa8.6□□□□□ -1.03
HTT-208ENST00000510626 PCSK1NQ9UHG2 260 aa8.6□□□□□ -1.03
HTT-208ENST00000510626 KPNA1P52294 538 aaPredicted RBP8.6□□□□□ -1.03
HTT-208ENST00000510626 HIST2H2ACQ16777 129 aaPredicted RBP8.6□□□□□ -1.03
HTT-208ENST00000510626 HIST2H2AA3Q6FI13 130 aa8.6□□□□□ -1.03
HTT-208ENST00000510626 EFHD2Q96C19 240 aaPredicted RBP8.6□□□□□ -1.03
HTT-208ENST00000510626 PDCD10Q9BUL8 212 aa8.6□□□□□ -1.03
HTT-208ENST00000510626 THUMPD3Q9BV44 507 aaKnown RBP8.6□□□□□ -1.03
HTT-208ENST00000510626 NUAK2Q9H093 628 aa8.6□□□□□ -1.03
HTT-208ENST00000510626 SLC39A10Q9ULF5 831 aa8.6□□□□□ -1.03
HTT-208ENST00000510626 DLC1Q96QB1 1528 aa8.6□□□□□ -1.03
HTT-208ENST00000510626 RBP3P10745 1247 aa8.6□□□□□ -1.03
HTT-208ENST00000510626 PPP2R1BP30154 601 aa8.6□□□□□ -1.03
HTT-208ENST00000510626 NEK5Q6P3R8 708 aa8.6□□□□□ -1.03
HTT-208ENST00000510626 ARHGEF3Q9NR81 526 aa8.6□□□□□ -1.03
HTT-208ENST00000510626 PTBP2Q9UKA9 531 aaKnown RBP8.6□□□□□ -1.03
HTT-208ENST00000510626 DFFAO00273 331 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 ZBTB22O15209 634 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 GPD1P21695 349 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 AKAP14Q86UN6 197 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 ITSN1Q15811 1721 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 SLC16A2P36021 539 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 AP3S2P59780 193 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 CHCHD6Q9BRQ6 235 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 LOC100653049A0A140TA62 436 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 PAX3P23760 479 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 GNA13Q14344 377 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 SLC7A14Q8TBB6 771 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 VAT1Q99536 393 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 AFF2P51816 1311 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 M0QX08 132 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 NR4A1P22736 598 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 LPIN1Q14693 890 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 XKR3Q5GH77 459 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 ZNF746Q6NUN9 644 aaPredicted RBP8.59□□□□□ -1.03
HTT-208ENST00000510626 DNAAF5Q86Y56 855 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 SYTL5Q8TDW5 730 aaPredicted RBP8.59□□□□□ -1.03
HTT-208ENST00000510626 L3MBTL3Q96JM7 780 aaPredicted RBP8.59□□□□□ -1.03
HTT-208ENST00000510626 SRPK1Q96SB4 655 aaKnown RBP8.59□□□□□ -1.03
HTT-208ENST00000510626 PRDX6P30041 224 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 RCVRNP35243 200 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 CAPGP40121 348 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 SPIRE1Q08AE8 756 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 ZNF75CPQ92670 426 aaPredicted RBP8.59□□□□□ -1.03
HTT-208ENST00000510626 TMCO6Q96DC7 493 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 LRFN2Q9ULH4 789 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 NDUFAF1Q9Y375 327 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 GLI1P08151 1106 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 PAEPP09466 180 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 RPL19P84098 196 aaKnown RBP8.59□□□□□ -1.03
HTT-208ENST00000510626 CACNB1Q02641 598 aaPredicted RBP8.59□□□□□ -1.03
HTT-208ENST00000510626 TTI2Q6NXR4 508 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 ZDHHC13Q8IUH4 622 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 RDH11Q8TC12 318 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 NAALADL1Q9UQQ1 740 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 KLHL33A6NCF5 533 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 VEPH1Q14D04 833 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 QPRTQ15274 297 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 INO80DQ53TQ3 878 aaPredicted RBP8.59□□□□□ -1.03
HTT-208ENST00000510626 PDPK2PQ6A1A2 396 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 ADCY4Q8NFM4 1077 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 CDH9Q9ULB4 789 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 EEF2KO00418 725 aaKnown RBP8.59□□□□□ -1.03
HTT-208ENST00000510626 CST8O60676 142 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 ITGA2P17301 1181 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 EGFL6Q8IUX8 553 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 METTL21EPA6NDL7 271 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 ATF6P18850 670 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 CCT3P49368 545 aaKnown RBP8.59□□□□□ -1.03
HTT-208ENST00000510626 RENBPP51606 427 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 PUS3Q9BZE2 481 aaKnown RBP8.59□□□□□ -1.03
HTT-208ENST00000510626 REXO4Q9GZR2 422 aaKnown RBP8.59□□□□□ -1.03
HTT-208ENST00000510626 MYLK2Q9H1R3 596 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 SPAG17Q6Q759 2223 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 NLRP1Q9C000 1473 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 PGK2P07205 417 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 TBCELQ5QJ74 424 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 VANGL2Q9ULK5 521 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 ACOT9Q9Y305 439 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 NEMP1O14524 444 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 ALDH1A3P47895 512 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 HNMTP50135 292 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 ZNF543Q08ER8 600 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 CLEC16AQ2KHT3 1053 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 CMPK2Q5EBM0 449 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 LIN54Q6MZP7 749 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 CHID1Q9BWS9 393 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 TBC1D13Q9NVG8 400 aa8.59□□□□□ -1.03
HTT-208ENST00000510626 PTPAQ15257 358 aa8.59□□□□□ -1.04
HTT-208ENST00000510626 SNAP47Q5SQN1 464 aa8.59□□□□□ -1.04
HTT-208ENST00000510626 HPS4Q9NQG7 708 aa8.59□□□□□ -1.04
HTT-208ENST00000510626 RAPGEFL1Q9UHV5 662 aa8.59□□□□□ -1.04
HTT-208ENST00000510626 RPS6KA6Q9UK32 745 aa8.59□□□□□ -1.04
HTT-208ENST00000510626 TNPO3Q9Y5L0 923 aaKnown RBP8.59□□□□□ -1.04
HTT-208ENST00000510626 MPZL2O60487 215 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 PDGFRAP16234 1089 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 TMEM132CQ8N3T6 1108 aa8.58□□□□□ -1.04
HTT-208ENST00000510626 NMRAL1Q9HBL8 299 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms