RNA–Protein interactions for RNA: ENST00000508502.5

SEC31A-227, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC31A, Length 3,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-227ENST00000508502 AP4E1Q9UPM8 1137 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 NR2E3Q9Y5X4 410 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 A8MXQ7 604 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 FCHO1O14526 889 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 CYB561D2O14569 222 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 KLF11O14901 512 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 ESRRAP11474 423 aaPredicted RBP10.11□□□□□ -0.79
SEC31A-227ENST00000508502 LCP1P13796 627 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 SNX16P57768 344 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 TMEM62Q0P6H9 643 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 BST1Q10588 318 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 PPIL2Q13356 520 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 C4orf50Q6ZRC1 276 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 ZNF534Q76KX8 674 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 ALYREFQ86V81 257 aaKnown RBP10.11□□□□□ -0.79
SEC31A-227ENST00000508502 GSDMBQ8TAX9 411 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 E2F7Q96AV8 911 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 EBNA1BP2Q99848 306 aaKnown RBP10.11□□□□□ -0.79
SEC31A-227ENST00000508502 C16orf70Q9BSU1 422 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 HES2Q9Y543 173 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 CITO14578 2027 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 SCN1AP35498 2009 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 GSC2O15499 205 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 GCATO75600 419 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 PDGFRBP09619 1106 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 CYP2C8P10632 490 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 CCDC130P13994 396 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 CHI3L2Q15782 390 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 GRIK4Q16099 956 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 DPYSL2Q16555 572 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 MAMDC4Q6UXC1 1216 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 DSTYKQ6XUX3 929 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 RINLQ6ZS11 566 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 FASTKD5Q7L8L6 764 aaKnown RBP10.11□□□□□ -0.79
SEC31A-227ENST00000508502 NUDCD3Q8IVD9 361 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 NDUFAF2Q8N183 169 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 ENDOVQ8N8Q3 282 aaKnown RBP10.11□□□□□ -0.79
SEC31A-227ENST00000508502 DEPDC1BQ8WUY9 529 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 MCUR1Q96AQ8 359 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 NMUR2Q9GZQ4 415 aa10.11□□□□□ -0.79
SEC31A-227ENST00000508502 ZNF395Q9H8N7 513 aaPredicted RBP10.11□□□□□ -0.79
SEC31A-227ENST00000508502 IL1BP01584 269 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 KITP10721 976 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 CCNFP41002 786 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 MAGEA3P43357 314 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 ATG16L1Q676U5 607 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 HEATR6Q6AI08 1181 aaKnown RBP10.1□□□□□ -0.79
SEC31A-227ENST00000508502 C4orf22Q6V702 233 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 ARID3BQ8IVW6 561 aaPredicted RBP10.1□□□□□ -0.79
SEC31A-227ENST00000508502 TRIM42Q8IWZ5 723 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 KCTD15Q96SI1 283 aaPredicted RBP10.1□□□□□ -0.79
SEC31A-227ENST00000508502 BATF3Q9NR55 127 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 RPL26L1Q9UNX3 145 aaKnown RBP10.1□□□□□ -0.79
SEC31A-227ENST00000508502 MFHAS1Q9Y4C4 1052 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 TRIP11Q15643 1979 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 COL1A2P08123 1366 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 FAM159BA6NKW6 160 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 E7ENQ6 273 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 GSTA2P09210 222 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 ZFXP17010 805 aaPredicted RBP10.1□□□□□ -0.79
SEC31A-227ENST00000508502 AMPD1P23109 780 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 PTPN9P43378 593 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 SOWAHAQ2M3V2 549 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 DCAF4L1Q3SXM0 396 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 KHDC1Q4VXA5 237 aaKnown RBP10.1□□□□□ -0.79
SEC31A-227ENST00000508502 CES4AQ5XG92 561 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 TRIM68Q6AZZ1 485 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 DENND5BQ6ZUT9 1274 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 APBB1IPQ7Z5R6 666 aaPredicted RBP10.1□□□□□ -0.79
SEC31A-227ENST00000508502 ZDHHC17Q8IUH5 632 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 CCDC185Q8N715 623 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 MTBPQ96DY7 904 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 NAF1Q96HR8 494 aaKnown RBP10.1□□□□□ -0.79
SEC31A-227ENST00000508502 CSPG4P5Q96PW8 444 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 EIF2AQ9BY44 585 aaKnown RBP10.1□□□□□ -0.79
SEC31A-227ENST00000508502 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.1□□□□□ -0.791e-6■■□□□ 11.5
SEC31A-227ENST00000508502 MARCOQ9UEW3 520 aaPredicted RBP10.1□□□□□ -0.79
SEC31A-227ENST00000508502 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.1□□□□□ -0.79
SEC31A-227ENST00000508502 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.1□□□□□ -0.79
SEC31A-227ENST00000508502 HMX2A2RU54 273 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 TPSB2P20231 275 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 KRT72Q14CN4 511 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 TPSAB1Q15661 275 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 MARCH8Q5T0T0 291 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 CASC4Q6P4E1 433 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 PYROXD2Q8N2H3 581 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 BEST2Q8NFU1 509 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 C7orf26Q96N11 449 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 QKIQ96PU8 341 aaKnown RBP eCLIP10.1□□□□□ -0.795e-7■■■■□ 20.3
SEC31A-227ENST00000508502 FAM167BQ9BTA0 163 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 FAM49AQ9H0Q0 323 aaPredicted RBP10.1□□□□□ -0.79
SEC31A-227ENST00000508502 DCLRE1BQ9H816 532 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 PLEKHA5Q9HAU0 1116 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 MTMR10Q9NXD2 777 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 TAS2R1Q9NYW7 299 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 PCDHA11Q9Y5I1 949 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 ZSWIM8A7E2V4 1837 aa10.1□□□□□ -0.79
SEC31A-227ENST00000508502 ZNF487B1APH4 448 aa10.09□□□□□ -0.79
SEC31A-227ENST00000508502 TOP3BO95985 862 aaKnown RBP10.09□□□□□ -0.79
SEC31A-227ENST00000508502 ADORA2AP29274 412 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms