RNA–Protein interactions for RNA: ENST00000507761.1

LINC01088-204, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 842 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-204ENST00000507761 GRHL2Q6ISB3 625 aa4.3□□□□□ -1.72
LINC01088-204ENST00000507761 CXorf57Q6NSI4 855 aaKnown RBP4.3□□□□□ -1.72
LINC01088-204ENST00000507761 P3H2Q8IVL5 708 aa4.3□□□□□ -1.72
LINC01088-204ENST00000507761 FSTL5Q8N475 847 aaPredicted RBP4.3□□□□□ -1.72
LINC01088-204ENST00000507761 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.3□□□□□ -1.72
LINC01088-204ENST00000507761 STAG1Q8WVM7 1258 aa4.3□□□□□ -1.72
LINC01088-204ENST00000507761 PIGKQ92643 395 aa4.3□□□□□ -1.72
LINC01088-204ENST00000507761 P2RY11Q96G91 374 aa4.3□□□□□ -1.72
LINC01088-204ENST00000507761 TUBB6Q9BUF5 446 aa4.3□□□□□ -1.72
LINC01088-204ENST00000507761 VPS33BQ9H267 617 aa4.3□□□□□ -1.72
LINC01088-204ENST00000507761 MRPL44Q9H9J2 332 aaKnown RBP4.3□□□□□ -1.72
LINC01088-204ENST00000507761 AGO4Q9HCK5 861 aaKnown RBP4.3□□□□□ -1.72
LINC01088-204ENST00000507761 MLXIPLQ9NP71 852 aa4.3□□□□□ -1.72
LINC01088-204ENST00000507761 DECR2Q9NUI1 292 aa4.3□□□□□ -1.72
LINC01088-204ENST00000507761 ITGB1BP2Q9UKP3 347 aa4.3□□□□□ -1.72
LINC01088-204ENST00000507761 OGDHLQ9ULD0 1010 aa4.3□□□□□ -1.72
LINC01088-204ENST00000507761 SIRT4Q9Y6E7 314 aaPredicted RBP4.3□□□□□ -1.72
LINC01088-204ENST00000507761 COL15A1P39059 1388 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 hCG_2014768A0A024R1R8 64 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 SLC22A23A1A5C7 686 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 F8W810 466 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 CTIFO43310 598 aaKnown RBP4.29□□□□□ -1.72
LINC01088-204ENST00000507761 TLX3O43711 291 aaPredicted RBP4.29□□□□□ -1.72
LINC01088-204ENST00000507761 MBPP02686 304 aaPredicted RBP4.29□□□□□ -1.72
LINC01088-204ENST00000507761 TGFB3P10600 412 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 RPS6KB1P23443 525 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 CDC25AP30304 524 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 HOXA7P31268 230 aaPredicted RBP4.29□□□□□ -1.72
LINC01088-204ENST00000507761 CACNB3P54284 484 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 DNASE1L3Q13609 305 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 PRTGQ2VWP7 1150 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 MANEALQ5VSG8 457 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 RBM44Q6ZP01 1051 aaKnown RBP4.29□□□□□ -1.72
LINC01088-204ENST00000507761 TFAP2DQ7Z6R9 452 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 KRT78Q8N1N4 520 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 RBMXL3Q8N7X1 1067 aaKnown RBP4.29□□□□□ -1.72
LINC01088-204ENST00000507761 B4GALNT2Q8NHY0 566 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 ZPBPQ9BS86 351 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 LRRC27Q9C0I9 530 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 FAM204AQ9H8W3 233 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 C1orf112Q9NSG2 853 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 CAPN11Q9UMQ6 739 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 HPSEQ9Y251 543 aa4.29□□□□□ -1.72
LINC01088-204ENST00000507761 HEMK1Q9Y5R4 338 aaPredicted RBP4.29□□□□□ -1.72
LINC01088-204ENST00000507761 EME2A4GXA9 379 aaPredicted RBP4.28□□□□□ -1.72
LINC01088-204ENST00000507761 C16orf96A6NNT2 1141 aa4.28□□□□□ -1.72
LINC01088-204ENST00000507761 ZNF814B7Z6K7 855 aa4.28□□□□□ -1.72
LINC01088-204ENST00000507761 WDR47O94967 919 aa4.28□□□□□ -1.72
LINC01088-204ENST00000507761 NDUFB8O95169 186 aa4.28□□□□□ -1.72
LINC01088-204ENST00000507761 EPN2O95208 641 aa4.28□□□□□ -1.72
LINC01088-204ENST00000507761 HTR7P34969 479 aa4.28□□□□□ -1.72
LINC01088-204ENST00000507761 CARSP49589 748 aaKnown RBP4.28□□□□□ -1.72
LINC01088-204ENST00000507761 MTA1Q13330 715 aa4.28□□□□□ -1.72
LINC01088-204ENST00000507761 RFX8Q6ZV50 586 aa4.28□□□□□ -1.72
LINC01088-204ENST00000507761 UNC13DQ70J99 1090 aa4.28□□□□□ -1.72
LINC01088-204ENST00000507761 B4GALNT4Q76KP1 1039 aa4.28□□□□□ -1.72
LINC01088-204ENST00000507761 SKAP1Q86WV1 359 aa4.28□□□□□ -1.72
LINC01088-204ENST00000507761 SLC44A5Q8NCS7 719 aa4.28□□□□□ -1.72
LINC01088-204ENST00000507761 MBD3L2Q8NHZ7 208 aaPredicted RBP4.28□□□□□ -1.72
LINC01088-204ENST00000507761 LRTOMTQ8WZ04 291 aa4.28□□□□□ -1.72
LINC01088-204ENST00000507761 APIPQ96GX9 242 aa4.28□□□□□ -1.72
LINC01088-204ENST00000507761 PRR11Q96HE9 360 aaPredicted RBP4.28□□□□□ -1.72
LINC01088-204ENST00000507761 SELENOOQ9BVL4 669 aa4.28□□□□□ -1.72
LINC01088-204ENST00000507761 SAP30LQ9HAJ7 183 aa4.28□□□□□ -1.72
LINC01088-204ENST00000507761 ZNF287Q9HBT7 754 aa4.28□□□□□ -1.72
LINC01088-204ENST00000507761 PAPOLBQ9NRJ5 636 aaKnown RBP4.28□□□□□ -1.72
LINC01088-204ENST00000507761 COG5Q9UP83 839 aa4.28□□□□□ -1.72
LINC01088-204ENST00000507761 TRIP12Q14669 1992 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-204ENST00000507761 C4orf47A7E2U8 309 aa4.27□□□□□ -1.73
LINC01088-204ENST00000507761 MAP4K4O95819 1239 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-204ENST00000507761 MYF5P13349 255 aa4.27□□□□□ -1.73
LINC01088-204ENST00000507761 DGKQP52824 942 aa4.27□□□□□ -1.73
LINC01088-204ENST00000507761 RAE1P78406 368 aaKnown RBP4.27□□□□□ -1.73
LINC01088-204ENST00000507761 RHDQ02161 417 aa4.27□□□□□ -1.73
LINC01088-204ENST00000507761 MTAPQ13126 283 aa4.27□□□□□ -1.73
LINC01088-204ENST00000507761 POLD3Q15054 466 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-204ENST00000507761 CNGA3Q16281 694 aa4.27□□□□□ -1.73
LINC01088-204ENST00000507761 MINDY4Q4G0A6 757 aa4.27□□□□□ -1.73
LINC01088-204ENST00000507761 ZNF585BQ52M93 769 aa4.27□□□□□ -1.73
LINC01088-204ENST00000507761 RNF220Q5VTB9 566 aa4.27□□□□□ -1.73
LINC01088-204ENST00000507761 C18orf65Q6ZTR6 163 aa4.27□□□□□ -1.73
LINC01088-204ENST00000507761 SESTD1Q86VW0 696 aa4.27□□□□□ -1.73
LINC01088-204ENST00000507761 UEVLDQ8IX04 471 aa4.27□□□□□ -1.73
LINC01088-204ENST00000507761 SDR16C5Q8N3Y7 309 aa4.27□□□□□ -1.73
LINC01088-204ENST00000507761 FAM227BQ96M60 508 aa4.27□□□□□ -1.73
LINC01088-204ENST00000507761 TMEM204Q9BSN7 226 aa4.27□□□□□ -1.73
LINC01088-204ENST00000507761 SLCO5A1Q9H2Y9 848 aa4.27□□□□□ -1.73
LINC01088-204ENST00000507761 MSRB1Q9NZV6 116 aa4.27□□□□□ -1.73
LINC01088-204ENST00000507761 PCDHA12Q9UN75 941 aa4.27□□□□□ -1.73
LINC01088-204ENST00000507761 TRBV5-3A0A0A0MS03 114 aa4.26□□□□□ -1.73
LINC01088-204ENST00000507761 TMEM272A0A1B0GTI8 110 aa4.26□□□□□ -1.73
LINC01088-204ENST00000507761 ANKRD62A6NC57 917 aa4.26□□□□□ -1.73
LINC01088-204ENST00000507761 SLC28A2O43868 658 aa4.26□□□□□ -1.73
LINC01088-204ENST00000507761 ZC3H11AO75152 810 aaKnown RBP eCLIP4.26□□□□□ -1.732e-6■□□□□ 8.9
LINC01088-204ENST00000507761 ST6GAL1P15907 406 aa4.26□□□□□ -1.73
LINC01088-204ENST00000507761 TFEBP19484 476 aa4.26□□□□□ -1.73
LINC01088-204ENST00000507761 TBXAS1P24557 533 aaPredicted RBP4.26□□□□□ -1.73
LINC01088-204ENST00000507761 YY1P25490 414 aa4.26□□□□□ -1.73
LINC01088-204ENST00000507761 IDUAP35475 653 aa4.26□□□□□ -1.73
LINC01088-204ENST00000507761 PGGT1BP53609 377 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms