RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 NAA35Q5VZE5 725 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 TXNDC8Q6A555 127 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 MAMSTRQ6ZN01 415 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 H2AFVQ71UI9 128 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 ZNF571Q7Z3V5 609 aaPredicted RBP8.83□□□□□ -1
PDGFC-205ENST00000506880 TMC6Q7Z403 805 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 BNIPLQ7Z465 357 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 RALGPS2Q86X27 583 aaPredicted RBP8.83□□□□□ -1
PDGFC-205ENST00000506880 RNF135Q8IUD6 432 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 SCUBE3Q8IX30 993 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 SYNPOQ8N3V7 929 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 SLC44A3Q8N4M1 653 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 CPA6Q8N4T0 437 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 NIPA2Q8N8Q9 360 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 TC2NQ8N9U0 490 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 USP13Q92995 863 aaPredicted RBP8.83□□□□□ -1
PDGFC-205ENST00000506880 ELMO3Q96BJ8 720 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 FAM149B1Q96BN6 582 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 BTN2A3PQ96KV6 586 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 C1orf74Q96LT6 269 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 FAM83CQ9BQN1 747 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 PRDM16Q9HAZ2 1276 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.83□□□□□ -1
PDGFC-205ENST00000506880 MARK1Q9P0L2 795 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 CHORDC1Q9UHD1 332 aaPredicted RBP8.83□□□□□ -1
PDGFC-205ENST00000506880 CYTH4Q9UIA0 394 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 TMEM59LQ9UK28 342 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 SH3BP1Q9Y3L3 701 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 NUMBLQ9Y6R0 609 aa8.83□□□□□ -1
PDGFC-205ENST00000506880 TCRBV5S1A1TA0A578 114 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 TYW5A2RUC4 315 aaKnown RBP8.82□□□□□ -1
PDGFC-205ENST00000506880 BTNL10A8MVZ5 291 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 PI4K2BG5E9Z4 385 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 LEFTY2O00292 366 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 ARNTLO00327 626 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 DDX3XO00571 662 aaKnown RBP eCLIP8.82□□□□□ -1
PDGFC-205ENST00000506880 NCAM2O15394 837 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 HOXC11O43248 304 aaPredicted RBP8.82□□□□□ -1
PDGFC-205ENST00000506880 AKR1B10O60218 316 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 MTA2O94776 668 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 ADCY5O95622 1261 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 FTLP02792 175 aaPredicted RBP8.82□□□□□ -1
PDGFC-205ENST00000506880 LCP1P13796 627 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 SDC4P31431 198 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 SSTR3P32745 418 aaPredicted RBP8.82□□□□□ -1
PDGFC-205ENST00000506880 ARHGAP25P42331 645 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 IFNAR2P48551 515 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 ZNF143P52747 638 aaPredicted RBP8.82□□□□□ -1
PDGFC-205ENST00000506880 GPC5P78333 572 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 KRT83P78385 493 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 NTHL1P78549 312 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 CYP4F8P98187 520 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 ARID5AQ03989 594 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 PTP4A2Q12974 167 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 PIGHQ14442 188 aaPredicted RBP8.82□□□□□ -1
PDGFC-205ENST00000506880 SPA17Q15506 151 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 IFI16Q16666 785 aaKnown RBP8.82□□□□□ -1
PDGFC-205ENST00000506880 ITPRIPL2Q3MIP1 535 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 ARL13BQ3SXY8 428 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 FBXO43Q4G163 708 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 ADGRF1Q5T601 910 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 FAM102AQ5T9C2 384 aaPredicted RBP8.82□□□□□ -1
PDGFC-205ENST00000506880 SDHAF4Q5VUM1 108 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 RNF43Q68DV7 783 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 OR6B2Q6IFH4 312 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 DNAJC24Q6P3W2 148 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 WDR59Q6PJI9 974 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 VITQ6UXI7 678 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 Q6ZNB5 142 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 ZNF662Q6ZS27 426 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 VSIG1Q86XK7 387 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 ARL14EPQ8N8R7 260 aaPredicted RBP8.82□□□□□ -1
PDGFC-205ENST00000506880 ATP6V0D2Q8N8Y2 350 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 GPR152Q8TDT2 470 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 CSGALNACT1Q8TDX6 532 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 SH3RF2Q8TEC5 729 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 CTNNBL1Q8WYA6 563 aaPredicted RBP8.82□□□□□ -1
PDGFC-205ENST00000506880 CENPIQ92674 756 aaPredicted RBP8.82□□□□□ -1
PDGFC-205ENST00000506880 EDAQ92838 391 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 NTAN1Q96AB6 310 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 SLC39A13Q96H72 371 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 ZFRQ96KR1 1074 aaKnown RBP8.82□□□□□ -1
PDGFC-205ENST00000506880 HAPLN3Q96S86 360 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 TBCBQ99426 244 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 NPY6RQ99463 290 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 CNPY3Q9BT09 278 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 SELENOOQ9BVL4 669 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 BRD9Q9H8M2 597 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 NHEJ1Q9H9Q4 299 aaPredicted RBP8.82□□□□□ -1
PDGFC-205ENST00000506880 TRPC7Q9HCX4 862 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 PRDM6Q9NQX0 595 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 ARHGAP20Q9P2F6 1191 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 LIMD1Q9UGP4 676 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 ADAMTS1Q9UHI8 967 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 NENFQ9UMX5 172 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 CPQQ9Y646 472 aa8.82□□□□□ -1
PDGFC-205ENST00000506880 ZDBF2Q9HCK1 2354 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 TECTAO75443 2155 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 COL4A2P08572 1712 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 C2orf78A6NCI8 922 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms