RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 C1orf54Q8WWF1 131 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 EDEM1Q92611 657 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 ACSF2Q96CM8 615 aaPredicted RBP12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 HAUS1Q96CS2 278 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 CCDC114Q96M63 670 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 RNF157Q96PX1 679 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 PNKPQ96T60 521 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 FERMT1Q9BQL6 677 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 ERP44Q9BS26 406 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 VN1R3Q9BXE9 311 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 EPC1Q9H2F5 836 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 SMOC2Q9H3U7 446 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 WDCPQ9H6R7 721 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 GDF3Q9NR23 364 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 COX16Q9P0S2 106 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 SLC12A6Q9UHW9 1150 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 DMGDHQ9UI17 866 aaKnown RBP12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 FBXW11Q9UKB1 542 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 ZNF148Q9UQR1 794 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 MYO16Q9Y6X6 1858 aa12.5□□□□□ -0.41
POLR2J3-211ENST00000506060 PLXNA3P51805 1871 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 A0A1W2PQH9 124 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 SLC38A8A6NNN8 435 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 ATP8B1O43520 1251 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 LIASO43766 372 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 ABLIM3O94929 683 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 FYNP06241 537 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 CTSAP10619 480 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 SYN1P17600 705 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 L1CAMP32004 1257 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 CCR1P32246 355 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 HTR7P34969 479 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 CA8P35219 290 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 ADRA1BP35368 520 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 PPP3CCP48454 512 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 CXCR3P49682 368 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 ARSEP51690 589 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 CLCN6P51797 869 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 VCPP55072 806 aaKnown RBP12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 UBE3AQ05086 875 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 NNTQ13423 1086 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 SNX1Q13596 522 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 HLTFQ14527 1009 aaKnown RBP eCLIP12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 LLGL1Q15334 1064 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 ANKRD20A8PQ5CZ79 823 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 ZC3H12AQ5D1E8 599 aaKnown RBP12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 MSANTD2Q6P1R3 559 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 EMBQ6PCB8 327 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 CYP4V2Q6ZWL3 525 aaPredicted RBP12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 CCDC89Q8N998 374 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 BBOF1Q8ND07 529 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 DQX1Q8TE96 717 aaKnown RBP12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 IFT81Q8WYA0 676 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 P3H4Q92791 437 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 NKD2Q969F2 451 aaPredicted RBP12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 FAF2Q96CS3 445 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 SAMD11Q96NU1 681 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 EPAS1Q99814 870 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 CLSTN3Q9BQT9 956 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 TTLL2Q9BWV7 592 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 EMILIN2Q9BXX0 1053 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 RXFP1Q9HBX9 757 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 PIGVQ9NUD9 493 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 UXTQ9UBK9 157 aaPredicted RBP12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 ZMYND8Q9ULU4 1186 aaPredicted RBP12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 SLC27A5Q9Y2P5 690 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 NR2E1Q9Y466 385 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 PTPRSQ13332 1948 aa12.49□□□□□ -0.41
POLR2J3-211ENST00000506060 CFAP69A5D8W1 941 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 EEF2KO00418 725 aaKnown RBP12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 IRAK2O43187 625 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 DAPK3O43293 454 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 RB1P06400 928 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 ITGAVP06756 1048 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 ADH1AP07327 375 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 RPL17P18621 184 aaKnown RBP12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 TFE3P19532 575 aaPredicted RBP12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 CTNNB1P35222 781 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 BMPR1AP36894 532 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 HCAR3P49019 387 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 NR2C2P49116 596 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 GPR15P49685 360 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 EPHB3P54753 998 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 DYNLT1P63172 113 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 CALCOCO2Q13137 446 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 PPP2R5DQ14738 602 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 SDHAF4Q5VUM1 108 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 CCDC149Q6ZUS6 474 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 TMC7Q7Z402 723 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 TAC4Q86UU9 113 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 ITIH5Q86UX2 942 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 TCEAL8Q8IYN2 117 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 ZNF276Q8N554 614 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 STKLD1Q8NE28 680 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 HDAC7Q8WUI4 952 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 UBE2OQ9C0C9 1292 aaKnown RBP12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 ZBP1Q9H171 429 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 ACBD3Q9H3P7 528 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 CYP4F11Q9HBI6 524 aa12.48□□□□□ -0.41
POLR2J3-211ENST00000506060 GPATCH2LQ9NWQ4 482 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms