RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 NDUFB7P17568 137 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 MCM7P33993 719 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 MAPK9P45984 424 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 FAM3BP58499 235 aaPredicted RBP7.17□□□□□ -1.26
NEDD4-203ENST00000502612 SUMO2P61956 95 aaKnown RBP7.17□□□□□ -1.26
NEDD4-203ENST00000502612 ABHD18Q0P651 414 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 KCNJ12Q14500 433 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 ZNF169Q14929 603 aaPredicted RBP7.17□□□□□ -1.26
NEDD4-203ENST00000502612 RNASE12Q5GAN4 147 aaKnown RBP7.17□□□□□ -1.26
NEDD4-203ENST00000502612 PLAC9Q5JTB6 97 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 TTC22Q5TAA0 569 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 C16orf89Q6UX73 402 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 RFX8Q6ZV50 586 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 TRABD2AQ86V40 505 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 TTC30AQ86WT1 665 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 FTSJ3Q8IY81 847 aaKnown RBP7.17□□□□□ -1.26
NEDD4-203ENST00000502612 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.17□□□□□ -1.26
NEDD4-203ENST00000502612 C3orf49Q96BT1 292 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 EIF3CQ99613 913 aaKnown RBP7.17□□□□□ -1.26
NEDD4-203ENST00000502612 FSD1LQ9BXM9 530 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 KRTAP9-9Q9BYP9 154 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 KRTAP9-4Q9BYQ2 154 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 BRD8Q9H0E9 1235 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 TAF1DQ9H5J8 278 aaPredicted RBP7.17□□□□□ -1.26
NEDD4-203ENST00000502612 VPS45Q9NRW7 570 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 AMFRQ9UKV5 643 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 ADAMTS5Q9UNA0 930 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 MYRFQ9Y2G1 1151 aa7.17□□□□□ -1.26
NEDD4-203ENST00000502612 CC2D2AQ9P2K1 1620 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 LOC105369274A0A096LPK9 316 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 LOC102723532A0A0G2JNH3 316 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 GXYLT2A0PJZ3 443 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 SUV39H1O43463 412 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 TJP3O95049 919 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 CYP21A2P08686 494 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 TACR2P21452 398 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 ADRA1DP25100 572 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 ADD2P35612 726 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 CCT8P50990 548 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 POLE2P56282 527 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 EEFSECP57772 596 aaKnown RBP7.16□□□□□ -1.26
NEDD4-203ENST00000502612 SIM1P81133 766 aaPredicted RBP7.16□□□□□ -1.26
NEDD4-203ENST00000502612 SF3A3Q12874 501 aaKnown RBP eCLIP7.16□□□□□ -1.26
NEDD4-203ENST00000502612 LMAN2Q12907 356 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 SEMA3BQ13214 749 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 GALNTL6Q49A17 601 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 NFRKBQ6P4R8 1299 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 KIRREL2Q6UWL6 708 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 RAB11FIP2Q7L804 512 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 KRT27Q7Z3Y8 459 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 ULK2Q8IYT8 1036 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 OR4N4Q8N0Y3 316 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 WDR60Q8WVS4 1066 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 HMGB4Q8WW32 186 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 RSC1A1Q92681 617 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 UBXN10Q96LJ8 280 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 SAYSD1Q9NPB0 183 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 IL17RBQ9NRM6 502 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 KIF17Q9P2E2 1029 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 MGAT4CQ9UBM8 478 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 VPS4AQ9UN37 437 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 CEP162Q5TB80 1403 aa7.16□□□□□ -1.26
NEDD4-203ENST00000502612 CCDC187A0A096LP49 1063 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 QSOX1O00391 747 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 KRT38O76015 456 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 MBPP02686 304 aaPredicted RBP7.15□□□□□ -1.26
NEDD4-203ENST00000502612 DLDP09622 509 aaKnown RBP7.15□□□□□ -1.26
NEDD4-203ENST00000502612 NPSP0C0P6 89 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 CKMT1AP12532 417 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 C6P13671 934 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 HSD3B1P14060 373 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 DRD4P21917 467 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 THBS4P35443 961 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 CYP4F2P78329 520 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 ZXDCQ2QGD7 858 aaPredicted RBP7.15□□□□□ -1.26
NEDD4-203ENST00000502612 PCID2Q5JVF3 399 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 CYP26C1Q6V0L0 522 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 NAPRTQ6XQN6 538 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 WDR53Q7Z5U6 358 aaPredicted RBP7.15□□□□□ -1.26
NEDD4-203ENST00000502612 RASAL3Q86YV0 1011 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 ANKRD18AQ8IVF6 992 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 ABHD11Q8NFV4 315 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 AFG1LQ8WV93 481 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 NPIPB3Q92617 1050 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 VPS50Q96JG6 964 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 PAAF1Q9BRP4 392 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 THAP7Q9BT49 309 aaPredicted RBP7.15□□□□□ -1.26
NEDD4-203ENST00000502612 CCDC134Q9H6E4 229 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 C9orf78Q9NZ63 289 aaPredicted RBP7.15□□□□□ -1.26
NEDD4-203ENST00000502612 KCND3Q9UK17 655 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 C19orf53Q9UNZ5 99 aaPredicted RBP7.15□□□□□ -1.26
NEDD4-203ENST00000502612 LZTS1Q9Y250 596 aa7.15□□□□□ -1.26
NEDD4-203ENST00000502612 KIF27Q86VH2 1401 aa7.15□□□□□ -1.27
NEDD4-203ENST00000502612 SLC38A8A6NNN8 435 aa7.14□□□□□ -1.27
NEDD4-203ENST00000502612 ZNF213O14771 459 aa7.14□□□□□ -1.27
NEDD4-203ENST00000502612 DGKQP52824 942 aa7.14□□□□□ -1.27
NEDD4-203ENST00000502612 RAE1P78406 368 aaKnown RBP7.14□□□□□ -1.27
NEDD4-203ENST00000502612 TAP1Q03518 808 aa7.14□□□□□ -1.27
NEDD4-203ENST00000502612 PRDM2Q13029 1718 aa7.14□□□□□ -1.27
NEDD4-203ENST00000502612 DNASE1L3Q13609 305 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms