RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ARL8BQ9NVJ2 186 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 AFF4Q9UHB7 1163 aaKnown RBP4.64□□□□□ -1.67
SMC4-227ENST00000497984 PCDHA12Q9UN75 941 aa4.64□□□□□ -1.67
SMC4-227ENST00000497984 NOP58Q9Y2X3 529 aaKnown RBP4.64□□□□□ -1.67
SMC4-227ENST00000497984 A0A0G2JK05 382 aa4.63□□□□□ -1.67
SMC4-227ENST00000497984 EME2A4GXA9 379 aaPredicted RBP4.63□□□□□ -1.67
SMC4-227ENST00000497984 LACTBL1A8MY62 500 aa4.63□□□□□ -1.67
SMC4-227ENST00000497984 FAM227AF5H4B4 570 aa4.63□□□□□ -1.67
SMC4-227ENST00000497984 MARCH6O60337 910 aa4.63□□□□□ -1.67
SMC4-227ENST00000497984 RFPL1O75677 317 aa4.63□□□□□ -1.67
SMC4-227ENST00000497984 NDUFB8O95169 186 aa4.63□□□□□ -1.67
SMC4-227ENST00000497984 PLA2G2AP14555 144 aa4.63□□□□□ -1.67
SMC4-227ENST00000497984 TPH1P17752 444 aa4.63□□□□□ -1.67
SMC4-227ENST00000497984 WDR5P61964 334 aaKnown RBP4.63□□□□□ -1.67
SMC4-227ENST00000497984 ZXDBP98169 803 aa4.63□□□□□ -1.67
SMC4-227ENST00000497984 CCDC15Q0P6D6 951 aa4.63□□□□□ -1.67
SMC4-227ENST00000497984 KCNAB1Q14722 419 aa4.63□□□□□ -1.67
SMC4-227ENST00000497984 RFX8Q6ZV50 586 aa4.63□□□□□ -1.67
SMC4-227ENST00000497984 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.63□□□□□ -1.67
SMC4-227ENST00000497984 SELENOOQ9BVL4 669 aa4.63□□□□□ -1.67
SMC4-227ENST00000497984 SAP30LQ9HAJ7 183 aa4.63□□□□□ -1.67
SMC4-227ENST00000497984 TYW1Q9NV66 732 aaKnown RBP4.63□□□□□ -1.67
SMC4-227ENST00000497984 MSRB1Q9NZV6 116 aa4.63□□□□□ -1.67
SMC4-227ENST00000497984 DNAJB11Q9UBS4 358 aa4.63□□□□□ -1.67
SMC4-227ENST00000497984 L1RE1Q9UN81 338 aa4.63□□□□□ -1.67
SMC4-227ENST00000497984 COG5Q9UP83 839 aa4.63□□□□□ -1.67
SMC4-227ENST00000497984 COL15A1P39059 1388 aa4.63□□□□□ -1.67
SMC4-227ENST00000497984 TRBV5-3A0A0A0MS03 114 aa4.62□□□□□ -1.67
SMC4-227ENST00000497984 ANKRD62A6NC57 917 aa4.62□□□□□ -1.67
SMC4-227ENST00000497984 CTNND1O60716 968 aaKnown RBP4.62□□□□□ -1.67
SMC4-227ENST00000497984 TMIGD3P0DMS9 266 aaPredicted RBP4.62□□□□□ -1.67
SMC4-227ENST00000497984 HOXB2P14652 356 aa4.62□□□□□ -1.67
SMC4-227ENST00000497984 BTF3P20290 206 aaKnown RBP4.62□□□□□ -1.67
SMC4-227ENST00000497984 RBL1P28749 1068 aa4.62□□□□□ -1.67
SMC4-227ENST00000497984 IDUAP35475 653 aa4.62□□□□□ -1.67
SMC4-227ENST00000497984 ALDH7A1P49419 539 aaKnown RBP4.62□□□□□ -1.67
SMC4-227ENST00000497984 MTAPQ13126 283 aa4.62□□□□□ -1.67
SMC4-227ENST00000497984 FHL3Q13643 280 aa4.62□□□□□ -1.67
SMC4-227ENST00000497984 CNGA2Q16280 664 aa4.62□□□□□ -1.67
SMC4-227ENST00000497984 ODF3L2Q3SX64 289 aa4.62□□□□□ -1.67
SMC4-227ENST00000497984 MANEALQ5VSG8 457 aa4.62□□□□□ -1.67
SMC4-227ENST00000497984 PLAG1Q6DJT9 500 aa4.62□□□□□ -1.67
SMC4-227ENST00000497984 RBM44Q6ZP01 1051 aaKnown RBP4.62□□□□□ -1.67
SMC4-227ENST00000497984 DCP1BQ8IZD4 617 aaKnown RBP4.62□□□□□ -1.67
SMC4-227ENST00000497984 CINPQ9BW66 212 aaPredicted RBP4.62□□□□□ -1.67
SMC4-227ENST00000497984 VPS33BQ9H267 617 aa4.62□□□□□ -1.67
SMC4-227ENST00000497984 CAPN11Q9UMQ6 739 aa4.62□□□□□ -1.67
SMC4-227ENST00000497984 TMEM272A0A1B0GTI8 110 aa4.61□□□□□ -1.67
SMC4-227ENST00000497984 A0A1W2PPC1 479 aa4.61□□□□□ -1.67
SMC4-227ENST00000497984 CFAP69A5D8W1 941 aa4.61□□□□□ -1.67
SMC4-227ENST00000497984 CYSRT1A8MQ03 144 aa4.61□□□□□ -1.67
SMC4-227ENST00000497984 NGFRP08138 427 aa4.61□□□□□ -1.67
SMC4-227ENST00000497984 TMEM225BP0DP42 221 aa4.61□□□□□ -1.67
SMC4-227ENST00000497984 ZKSCAN1P17029 563 aaPredicted RBP4.61□□□□□ -1.67
SMC4-227ENST00000497984 SLC12A2P55011 1212 aa4.61□□□□□ -1.67
SMC4-227ENST00000497984 RAE1P78406 368 aaKnown RBP4.61□□□□□ -1.67
SMC4-227ENST00000497984 FMO1Q01740 532 aa4.61□□□□□ -1.67
SMC4-227ENST00000497984 HYAL1Q12794 435 aa4.61□□□□□ -1.67
SMC4-227ENST00000497984 SLC44A5Q8NCS7 719 aa4.61□□□□□ -1.67
SMC4-227ENST00000497984 SMCR8Q8TEV9 937 aaPredicted RBP4.61□□□□□ -1.67
SMC4-227ENST00000497984 STAG1Q8WVM7 1258 aa4.61□□□□□ -1.67
SMC4-227ENST00000497984 PIGKQ92643 395 aa4.61□□□□□ -1.67
SMC4-227ENST00000497984 MOV10Q9HCE1 1003 aaKnown RBP4.61□□□□□ -1.67
SMC4-227ENST00000497984 DECR2Q9NUI1 292 aa4.61□□□□□ -1.67
SMC4-227ENST00000497984 TPCN1Q9ULQ1 816 aa4.61□□□□□ -1.67
SMC4-227ENST00000497984 F8W810 466 aa4.6□□□□□ -1.67
SMC4-227ENST00000497984 KRT86O43790 486 aa4.6□□□□□ -1.67
SMC4-227ENST00000497984 SNX2O60749 519 aa4.6□□□□□ -1.67
SMC4-227ENST00000497984 ATG13O75143 517 aa4.6□□□□□ -1.67
SMC4-227ENST00000497984 SYF2O95926 243 aaKnown RBP4.6□□□□□ -1.67
SMC4-227ENST00000497984 ST6GAL1P15907 406 aa4.6□□□□□ -1.67
SMC4-227ENST00000497984 MT3P25713 68 aa4.6□□□□□ -1.67
SMC4-227ENST00000497984 ARRB2P32121 409 aa4.6□□□□□ -1.67
SMC4-227ENST00000497984 PGGT1BP53609 377 aa4.6□□□□□ -1.67
SMC4-227ENST00000497984 KRT81Q14533 505 aa4.6□□□□□ -1.67
SMC4-227ENST00000497984 B4GALNT4Q76KP1 1039 aa4.6□□□□□ -1.67
SMC4-227ENST00000497984 YAF2Q8IY57 180 aa4.6□□□□□ -1.67
SMC4-227ENST00000497984 FAM177A1Q8N128 213 aaPredicted RBP4.6□□□□□ -1.67
SMC4-227ENST00000497984 TMEM204Q9BSN7 226 aa4.6□□□□□ -1.67
SMC4-227ENST00000497984 TUBB6Q9BUF5 446 aa4.6□□□□□ -1.67
SMC4-227ENST00000497984 ICKQ9UPZ9 632 aa4.6□□□□□ -1.67
SMC4-227ENST00000497984 USP12O75317 370 aa4.59□□□□□ -1.67
SMC4-227ENST00000497984 WDR47O94967 919 aa4.59□□□□□ -1.67
SMC4-227ENST00000497984 TGFB3P10600 412 aa4.59□□□□□ -1.67
SMC4-227ENST00000497984 TNFRSF8P28908 595 aa4.59□□□□□ -1.67
SMC4-227ENST00000497984 POLD2P49005 469 aa4.59□□□□□ -1.67
SMC4-227ENST00000497984 MTA1Q13330 715 aa4.59□□□□□ -1.67
SMC4-227ENST00000497984 INPP5JQ15735 1006 aaPredicted RBP4.59□□□□□ -1.67
SMC4-227ENST00000497984 AASDHQ4L235 1098 aaPredicted RBP4.59□□□□□ -1.67
SMC4-227ENST00000497984 MZT2AQ6P582 158 aa4.59□□□□□ -1.67
SMC4-227ENST00000497984 UNC13DQ70J99 1090 aa4.59□□□□□ -1.67
SMC4-227ENST00000497984 SESTD1Q86VW0 696 aa4.59□□□□□ -1.67
SMC4-227ENST00000497984 P3H2Q8IVL5 708 aa4.59□□□□□ -1.67
SMC4-227ENST00000497984 MBD3L2Q8NHZ7 208 aaPredicted RBP4.59□□□□□ -1.67
SMC4-227ENST00000497984 ZCWPW1Q9H0M4 648 aa4.59□□□□□ -1.67
SMC4-227ENST00000497984 PAPOLBQ9NRJ5 636 aaKnown RBP4.59□□□□□ -1.67
SMC4-227ENST00000497984 ABHD10Q9NUJ1 306 aa4.59□□□□□ -1.67
SMC4-227ENST00000497984 DDX56Q9NY93 547 aaKnown RBP4.59□□□□□ -1.67
SMC4-227ENST00000497984 AGO2Q9UKV8 859 aaKnown RBP4.59□□□□□ -1.67
SMC4-227ENST00000497984 HPSEQ9Y251 543 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms