RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 SERPINC1P01008 464 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 HMBSP08397 361 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 TNFRSF4P43489 277 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 PXNP49023 591 aaPredicted RBP16.05■□□□□ 0.16
NUP50-219ENST00000497960 RGS7P49802 495 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 LPAL2Q16609 132 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 EXOC3L4Q17RC7 722 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 HSF5Q4G112 596 aaPredicted RBP16.05■□□□□ 0.16
NUP50-219ENST00000497960 BSPRYQ5W0U4 402 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 LAIR1Q6GTX8 287 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 TRIM65Q6PJ69 517 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 Q6ZNB5 142 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 ETFBKMTQ8IXQ9 262 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 SCML4Q8N228 414 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 DCLK2Q8N568 766 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 HSFY1Q96LI6 401 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 ZSWIM1Q9BR11 485 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 POLR3BQ9NW08 1133 aaPredicted RBP16.05■□□□□ 0.16
NUP50-219ENST00000497960 MARK1Q9P0L2 795 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 CNTN6Q9UQ52 1028 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 AXIN1O15169 862 aa16.04■□□□□ 0.16
NUP50-219ENST00000497960 MED7O43513 233 aa16.04■□□□□ 0.16
NUP50-219ENST00000497960 TYRP14679 529 aa16.04■□□□□ 0.16
NUP50-219ENST00000497960 SLC9A1P19634 815 aa16.04■□□□□ 0.16
NUP50-219ENST00000497960 CORO1AP31146 461 aaKnown RBP16.04■□□□□ 0.16
NUP50-219ENST00000497960 HOXC13P31276 330 aa16.04■□□□□ 0.16
NUP50-219ENST00000497960 CHKAP35790 457 aa16.04■□□□□ 0.16
NUP50-219ENST00000497960 SRSF5Q13243 272 aaKnown RBP16.04■□□□□ 0.16
NUP50-219ENST00000497960 FILIP1LQ4L180 1135 aa16.04■□□□□ 0.16
NUP50-219ENST00000497960 GRAMD4Q6IC98 578 aa16.04■□□□□ 0.16
NUP50-219ENST00000497960 PMF1Q6P1K2 205 aa16.04■□□□□ 0.16
NUP50-219ENST00000497960 KIAA2013Q8IYS2 634 aa16.04■□□□□ 0.16
NUP50-219ENST00000497960 CCDC33Q8N5R6 958 aa16.04■□□□□ 0.16
NUP50-219ENST00000497960 GPR161Q8N6U8 529 aaKnown RBP16.04■□□□□ 0.16
NUP50-219ENST00000497960 TSTD1Q8NFU3 115 aa16.04■□□□□ 0.16
NUP50-219ENST00000497960 GOLGA1Q92805 767 aa16.04■□□□□ 0.16
NUP50-219ENST00000497960 ABCC13Q9NSE7 274 aa16.04■□□□□ 0.16
NUP50-219ENST00000497960 DNAJC17Q9NVM6 304 aaKnown RBP16.04■□□□□ 0.16
NUP50-219ENST00000497960 APEX2Q9UBZ4 518 aa16.04■□□□□ 0.16
NUP50-219ENST00000497960 MMP17Q9ULZ9 603 aa16.04■□□□□ 0.16
NUP50-219ENST00000497960 USP34Q70CQ2 3546 aa16.04■□□□□ 0.16
NUP50-219ENST00000497960 MYO15AQ9UKN7 3530 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 MYO18AQ92614 2054 aaKnown RBP16.03■□□□□ 0.16
NUP50-219ENST00000497960 YJEFN3A6XGL0 299 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 E7ENQ6 273 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 CACNG3O60359 315 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 RPP40O75818 363 aaKnown RBP16.03■□□□□ 0.16
NUP50-219ENST00000497960 FBXO21O94952 628 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 KLF8O95600 359 aaPredicted RBP16.03■□□□□ 0.16
NUP50-219ENST00000497960 CALCAP01258 141 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 KLKB1P03952 638 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 TIE1P35590 1138 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 USP8P40818 1118 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 DAOAP59103 153 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 UBXN1Q04323 297 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 MESP2Q0VG99 397 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 ARHGAP44Q17R89 818 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 EOGTQ5NDL2 527 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 BHLHA9Q7RTU4 235 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.03■□□□□ 0.16
NUP50-219ENST00000497960 FMNL3Q8IVF7 1028 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 SFTPA1Q8IWL2 248 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 PHTF2Q8N3S3 785 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 TERB1Q8NA31 727 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 GAB3Q8WWW8 586 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 IRGQQ8WZA9 623 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 EDEM1Q92611 657 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 PLD4Q96BZ4 506 aa16.03■□□□□ 0.16
NUP50-219ENST00000497960 LSM14BQ9BX40 385 aaKnown RBP16.03■□□□□ 0.16
NUP50-219ENST00000497960 HBS1LQ9Y450 684 aaKnown RBP16.03■□□□□ 0.16
NUP50-219ENST00000497960 PIK3R2O00459 728 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 THAP12O43422 761 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 CYBBP04839 570 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 RETP07949 1114 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 PON1P27169 355 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 GNA15P30679 374 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 KIR2DL1P43626 348 aaPredicted RBP16.02■□□□□ 0.16
NUP50-219ENST00000497960 ACADSBP45954 432 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 HARS2P49590 506 aaKnown RBP16.02■□□□□ 0.16
NUP50-219ENST00000497960 DGKEP52429 567 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 FANCCQ00597 558 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 CRY1Q16526 586 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 C10orf76Q5T2E6 689 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 EMC10Q5UCC4 262 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 GJB7Q6PEY0 223 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 CACNA2D4Q7Z3S7 1137 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 TRMT11Q7Z4G4 463 aaKnown RBP16.02■□□□□ 0.16
NUP50-219ENST00000497960 DENND1CQ8IV53 801 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 ALLCQ8N6M5 410 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 IL17RCQ8NAC3 791 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 TXNDC5Q8NBS9 432 aaKnown RBP16.02■□□□□ 0.16
NUP50-219ENST00000497960 KCNV2Q8TDN2 545 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 ZNF606Q8WXB4 792 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 BHMTQ93088 406 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 PCMTD1Q96MG8 357 aaPredicted RBP16.02■□□□□ 0.16
NUP50-219ENST00000497960 ST7Q9NRC1 585 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 EBF1Q9UH73 591 aa16.02■□□□□ 0.16
NUP50-219ENST00000497960 AGO1Q9UL18 857 aaKnown RBP16.02■□□□□ 0.16
NUP50-219ENST00000497960 SART1O43290 800 aaKnown RBP16.01■□□□□ 0.15
NUP50-219ENST00000497960 ALDH1A2O94788 518 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms