RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, human

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2A-210	ENST00000497730	KRT27	Q7Z3Y8	459 aa		6.59	□□□□□ -1.35
TRA2A-210	ENST00000497730	BCDIN3D	Q7Z5W3	292 aa	Known RBP	6.59	□□□□□ -1.35
TRA2A-210	ENST00000497730	NRSN1	Q8IZ57	195 aa		6.59	□□□□□ -1.35
TRA2A-210	ENST00000497730	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	6.59	□□□□□ -1.35
TRA2A-210	ENST00000497730	CCT6B	Q92526	530 aa		6.59	□□□□□ -1.35
TRA2A-210	ENST00000497730	SNX18	Q96RF0	628 aa		6.59	□□□□□ -1.35
TRA2A-210	ENST00000497730	KATNAL1	Q9BW62	490 aa		6.59	□□□□□ -1.35
TRA2A-210	ENST00000497730	CINP	Q9BW66	212 aa	Predicted RBP	6.59	□□□□□ -1.35
TRA2A-210	ENST00000497730	MAGEH1	Q9H213	219 aa		6.59	□□□□□ -1.35
TRA2A-210	ENST00000497730	SAP30L	Q9HAJ7	183 aa		6.59	□□□□□ -1.35
TRA2A-210	ENST00000497730	ARPP21	Q9UBL0	812 aa	Predicted RBP	6.59	□□□□□ -1.35
TRA2A-210	ENST00000497730	VPS4A	Q9UN37	437 aa		6.59	□□□□□ -1.35
TRA2A-210	ENST00000497730	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	6.59	□□□□□ -1.35
TRA2A-210	ENST00000497730	PRAMEF2	O60811	474 aa		6.58	□□□□□ -1.36
TRA2A-210	ENST00000497730	IGLV2-14	P01704	120 aa		6.58	□□□□□ -1.36
TRA2A-210	ENST00000497730	TMIGD3	P0DMS9	266 aa	Predicted RBP	6.58	□□□□□ -1.36
TRA2A-210	ENST00000497730	ALAD	P13716	330 aa		6.58	□□□□□ -1.36
TRA2A-210	ENST00000497730	GYS1	P13807	737 aa		6.58	□□□□□ -1.36
TRA2A-210	ENST00000497730	GPC5	P78333	572 aa		6.58	□□□□□ -1.36
TRA2A-210	ENST00000497730	CCDC15	Q0P6D6	951 aa		6.58	□□□□□ -1.36
TRA2A-210	ENST00000497730	FAM90A2P	Q658T7	463 aa		6.58	□□□□□ -1.36
TRA2A-210	ENST00000497730	LIN54	Q6MZP7	749 aa		6.58	□□□□□ -1.36
TRA2A-210	ENST00000497730	FBXO42	Q6P3S6	717 aa		6.58	□□□□□ -1.36
TRA2A-210	ENST00000497730	CLASRP	Q8N2M8	674 aa	Known RBP	6.58	□□□□□ -1.36
TRA2A-210	ENST00000497730	MAFA	Q8NHW3	353 aa	Predicted RBP	6.58	□□□□□ -1.36
TRA2A-210	ENST00000497730	WDR60	Q8WVS4	1066 aa		6.58	□□□□□ -1.36
TRA2A-210	ENST00000497730	REPS1	Q96D71	796 aa		6.58	□□□□□ -1.36
TRA2A-210	ENST00000497730	HS6ST2	Q96MM7	605 aa		6.58	□□□□□ -1.36
TRA2A-210	ENST00000497730	TP63	Q9H3D4	680 aa	Predicted RBP	6.58	□□□□□ -1.36
TRA2A-210	ENST00000497730	SPATA31A6	Q5VVP1	1343 aa		6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	COL11A2	P13942	1736 aa	Predicted RBP	6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	LRRC3C	A6NJW4	275 aa		6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	CTIF	O43310	598 aa	Known RBP	6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	C1QL1	O75973	258 aa		6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	CER1	O95813	267 aa		6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	APEH	P13798	732 aa	Known RBP	6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	GALNS	P34059	522 aa		6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	DNASE1L3	Q13609	305 aa		6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	BTBD16	Q32M84	506 aa		6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	TMEM119	Q4V9L6	283 aa		6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	SULT6B1	Q6IMI4	303 aa		6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	MSANTD2	Q6P1R3	559 aa		6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	KLHL17	Q6TDP4	642 aa		6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	C12orf76	Q8N812	135 aa	Predicted RBP	6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	OR1N1	Q8NGS0	311 aa		6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	OVCA2	Q8WZ82	227 aa		6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	EID2B	Q96D98	161 aa		6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	R3HDML	Q9H3Y0	253 aa		6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	VPS45	Q9NRW7	570 aa		6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	ASIC5	Q9NY37	505 aa		6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	SERGEF	Q9UGK8	458 aa		6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	MORC2	Q9Y6X9	1032 aa	Predicted RBP	6.57	□□□□□ -1.36
TRA2A-210	ENST00000497730	GCAT	O75600	419 aa		6.56	□□□□□ -1.36
TRA2A-210	ENST00000497730	EIF3J	O75822	258 aa	Known RBP	6.56	□□□□□ -1.36
TRA2A-210	ENST00000497730	ACTL6B	O94805	426 aa		6.56	□□□□□ -1.36
TRA2A-210	ENST00000497730	MMP8	P22894	467 aa		6.56	□□□□□ -1.36
TRA2A-210	ENST00000497730	ELL	P55199	621 aa	Predicted RBP	6.56	□□□□□ -1.36
TRA2A-210	ENST00000497730	RAE1	P78406	368 aa	Known RBP	6.56	□□□□□ -1.36
TRA2A-210	ENST00000497730	KRTAP15-1	Q3LI76	137 aa		6.56	□□□□□ -1.36
TRA2A-210	ENST00000497730	SUMO4	Q6EEV6	95 aa		6.56	□□□□□ -1.36
TRA2A-210	ENST00000497730	ZG16B	Q96DA0	208 aa		6.56	□□□□□ -1.36
TRA2A-210	ENST00000497730	EDC3	Q96F86	508 aa	Known RBP	6.56	□□□□□ -1.36
TRA2A-210	ENST00000497730	RTKN	Q9BST9	563 aa		6.56	□□□□□ -1.36
TRA2A-210	ENST00000497730	PAGR1	Q9BTK6	254 aa		6.56	□□□□□ -1.36
TRA2A-210	ENST00000497730	SORBS1	Q9BX66	1292 aa	Known RBP	6.56	□□□□□ -1.36
TRA2A-210	ENST00000497730	FBXO28	Q9NVF7	368 aa		6.56	□□□□□ -1.36
TRA2A-210	ENST00000497730	HERC5	Q9UII4	1024 aa	Known RBP	6.56	□□□□□ -1.36
TRA2A-210	ENST00000497730	PCDHB7	Q9Y5E2	793 aa		6.56	□□□□□ -1.36
TRA2A-210	ENST00000497730	CCDC187	A0A096LP49	1063 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	KIF28P	B7ZC32	967 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730		H7C1Q1	480 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730		M0QZQ0	153 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	RPP40	O75818	363 aa	Known RBP	6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	MT-CO3	P00414	261 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	IGHMBP2	P38935	993 aa	Known RBP	6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	HAL	P42357	657 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	GRK6	P43250	576 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	CFHR3	Q02985	330 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	MFSD13A	Q14CX5	517 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	TIGD6	Q17RP2	521 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	GORAB	Q5T7V8	394 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	ATPAF1	Q5TC12	328 aa	Predicted RBP	6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	TMEM65	Q6PI78	240 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	DCDC5	Q6ZRR9	648 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	RD3	Q7Z3Z2	195 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	ADGRG3	Q86Y34	549 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	CCDC117	Q8IWD4	279 aa	Predicted RBP	6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	EXOC8	Q8IYI6	725 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	LINC01465	Q8N7H1	131 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	ANKRD42	Q8N9B4	389 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	FAM98A	Q8NCA5	519 aa	Known RBP	6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	SLC22A17	Q8WUG5	538 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	MCRS1	Q96EZ8	462 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	CCDC17	Q96LX7	622 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	MYLK2	Q9H1R3	596 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	MLXIP	Q9HAP2	919 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	AGO4	Q9HCK5	861 aa	Known RBP	6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	RIPOR2	Q9Y4F9	1068 aa		6.55	□□□□□ -1.36
TRA2A-210	ENST00000497730	CLIC1	O00299	241 aa		6.54	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms