RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	BBS2	Q9BXC9	721 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	UBE2T	Q9NPD8	197 aa	Predicted RBP	10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	NCDN	Q9UBB6	729 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	GMEB2	Q9UKD1	530 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	NUDT5	Q9UKK9	219 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	AGO1	Q9UL18	857 aa	Known RBP	10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	PLXND1	Q9Y4D7	1925 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	BECN2	A8MW95	431 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891		M0QYV0	167 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	SCAMP3	O14828	347 aa	Known RBP	10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	NPC1	O15118	1278 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	RPP40	O75818	363 aa	Known RBP	10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	SLC9A1	P19634	815 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	SDHB	P21912	280 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	BRD2	P25440	801 aa	Known RBP	10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	EEF1G	P26641	437 aa	Known RBP	10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	CORO1A	P31146	461 aa	Known RBP	10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	RING1	Q06587	406 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	EFEMP1	Q12805	493 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	E2F5	Q15329	346 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	ANO4	Q32M45	955 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	C2orf27A	Q580R0	203 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	MIIP	Q5JXC2	388 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	EOGT	Q5NDL2	527 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	FYB2	Q5VWT5	728 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	DPY19L2P1	Q6NXN4	242 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	RSRC2	Q7L4I2	434 aa	Known RBP	10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	CACNA2D4	Q7Z3S7	1137 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	TMEM110	Q86TL2	294 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	OLIG1	Q8TAK6	271 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	ENOX1	Q8TC92	643 aa	Known RBP	10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	TRIM62	Q9BVG3	475 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	SLC4A5	Q9BY07	1137 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	SLC2A11	Q9BYW1	496 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	NDST4	Q9H3R1	872 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	CD248	Q9HCU0	757 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	SIX2	Q9NPC8	291 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	DLL3	Q9NYJ7	618 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	RASAL2	Q9UJF2	1139 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	PCDHGC3	Q9UN70	934 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	PCDHGA5	Q9Y5G8	931 aa		10.75	□□□□□ -0.69
NEPRO-222	ENST00000494891	SLC12A8	A0AV02	714 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	TBC1D3B	A6NDS4	549 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	PRR5-ARHGAP8	B1AHC4	643 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	NEDD8-MDP1	E9PL57	170 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	ADAM23	O75077	832 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	LTF	P02788	710 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	C7	P10643	843 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	HOXC13	P31276	330 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	MTIF2	P46199	727 aa	Known RBP	10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	HARS2	P49590	506 aa	Known RBP	10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	DGKG	P49619	791 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	ARHGAP8	P85298	464 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	LMNB2	Q03252	620 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	ENPP2	Q13822	863 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	TPD52L1	Q16890	204 aa	Predicted RBP	10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	VWA3B	Q502W6	1294 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	MPP7	Q5T2T1	576 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	HEATR6	Q6AI08	1181 aa	Known RBP	10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	GRAMD4	Q6IC98	578 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	TMEM92	Q6UXU6	159 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	FMNL3	Q8IVF7	1028 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	SFTPA1	Q8IWL2	248 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	DCLK2	Q8N568	766 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	TXNDC5	Q8NBS9	432 aa	Known RBP	10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	TSTD1	Q8NFU3	115 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	GPT2	Q8TD30	523 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	RNF139	Q8WU17	664 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	P2RY11	Q96G91	374 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	HHIP	Q96QV1	700 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	GABRG3	Q99928	467 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	TUBGCP2	Q9BSJ2	902 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	CRACR2A	Q9BSW2	395 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	LHX5	Q9H2C1	402 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	DNAJC17	Q9NVM6	304 aa	Known RBP	10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	HCN2	Q9UL51	889 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	DNAH14	Q0VDD8	3507 aa		10.74	□□□□□ -0.69
NEPRO-222	ENST00000494891	LAMA1	P25391	3075 aa		10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	GOLGA6L22	H0YM25	854 aa		10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	SGK1	O00141	431 aa		10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	IRAK2	O43187	625 aa		10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	ALDH1A2	O94788	518 aa		10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	LETM1	O95202	739 aa	Predicted RBP	10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	EPN2	O95208	641 aa		10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	KLF8	O95600	359 aa	Predicted RBP	10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	FYN	P06241	537 aa		10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	GLI1	P08151	1106 aa		10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	KRT5	P13647	590 aa		10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	LCP1	P13796	627 aa		10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	GNA15	P30679	374 aa		10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	NTSR1	P30989	418 aa		10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	TIE1	P35590	1138 aa		10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	FOXK2	Q01167	660 aa		10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	KDSR	Q06136	332 aa		10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	C1QBP	Q07021	282 aa	Known RBP	10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	EIF4EBP2	Q13542	120 aa	Predicted RBP	10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	EIF4H	Q15056	248 aa	Known RBP	10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	CSRP2	Q16527	193 aa		10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	PLK5	Q496M5	336 aa		10.73	□□□□□ -0.69
NEPRO-222	ENST00000494891	MPPE1	Q53F39	396 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms