RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	COQ8B	Q96D53	544 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	WAC	Q9BTA9	647 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	VN1R3	Q9BXE9	311 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	RMI1	Q9H9A7	625 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	SACM1L	Q9NTJ5	587 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	ISM1	B1AKI9	464 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672		H0YHG0	523 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	PYCARD-AS1	I3L0S3	204 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	TRIM38	O00635	465 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	TBX3	O15119	743 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	CD3EAP	O15446	510 aa	Known RBP	5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	NTN1	O95631	604 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	S100B	P04271	92 aa	Predicted RBP	5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	HOXB6	P17509	224 aa	Known RBP	5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	CAPN2	P17655	700 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	RPL17	P18621	184 aa	Known RBP	5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	DIO1	P49895	249 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	GATM	P50440	423 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	GTF2A1	P52655	376 aa	Predicted RBP	5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	TMED1	Q13445	227 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	UBE4A	Q14139	1066 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	TWIST1	Q15672	202 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	ALDH1L2	Q3SY69	923 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	CXorf57	Q6NSI4	855 aa	Known RBP	5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	NDUFAF2	Q8N183	169 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	PAF1	Q8N7H5	531 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	OR56A3	Q8NH54	315 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	C17orf50	Q8WW18	174 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	MAML1	Q92585	1016 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	CTHRC1	Q96CG8	243 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	MPP4	Q96JB8	637 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	ZC3H10	Q96K80	434 aa	Known RBP	5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	TRIM36	Q9NQ86	728 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	DNMT3B	Q9UBC3	853 aa	Known RBP	5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	LPAR3	Q9UBY5	353 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	TMCC3	Q9ULS5	477 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	MAFF	Q9ULX9	164 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	RABL2B	Q9UNT1	228 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	IKBKG	Q9Y6K9	419 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	USP19	O94966	1318 aa		5.22	□□□□□ -1.57
CCDC66-222	ENST00000494672	TRIM43B	A6NCK2	446 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	TULP2	O00295	520 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	INSIG1	O15503	277 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	TMPRSS11D	O60235	418 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	SNHG28	P0DPA3	235 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	APEH	P13798	732 aa	Known RBP	5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	ZKSCAN1	P17029	563 aa	Predicted RBP	5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	KLRC1	P26715	233 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	TIAL1	Q01085	375 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	MINDY4	Q4G0A6	757 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	FILIP1L	Q4L180	1135 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	VSTM1	Q6UX27	236 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	RANBP10	Q6VN20	620 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	ZNF517	Q6ZMY9	492 aa	Predicted RBP	5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	MICU3	Q86XE3	530 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	COL23A1	Q86Y22	540 aa	Predicted RBP	5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	LIX1L	Q8IVB5	337 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	C16orf71	Q8IYS4	520 aa	Predicted RBP	5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	MYO1H	Q8N1T3	1032 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	MIGA1	Q8NAN2	632 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	TRIM43	Q96BQ3	446 aa	Predicted RBP	5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	ZBTB45	Q96K62	511 aa	Predicted RBP	5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	RMDN2	Q96LZ7	410 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	HS6ST2	Q96MM7	605 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	TTC14	Q96N46	770 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	IWS1	Q96ST2	819 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	IQCG	Q9H095	443 aa	Known RBP	5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	DHX36	Q9H2U1	1008 aa	Known RBP	5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	RWDD1	Q9H446	243 aa	Predicted RBP	5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	GAR1	Q9NY12	217 aa	Known RBP	5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	CPNE7	Q9UBL6	633 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	NKX1-2	Q9UD57	310 aa	Predicted RBP	5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	TPCN1	Q9ULQ1	816 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	KIF3A	Q9Y496	699 aa		5.21	□□□□□ -1.58
CCDC66-222	ENST00000494672	TMCO5B	A8MYB1	307 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	FAM227A	F5H4B4	570 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672		H3BNC9	293 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672		H7C4K7	107 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	NPHP1	O15259	732 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	BRAF	P15056	766 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	CD19	P15391	556 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	STIP1	P31948	543 aa	Known RBP	5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	PTDSS1	P48651	473 aa	Known RBP	5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	ZNF131	P52739	623 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	ARHGEF7	Q14155	803 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	SLC29A2	Q14542	456 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	LARS2	Q15031	903 aa	Known RBP	5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	CNN3	Q15417	329 aa	Known RBP	5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	RBMS2	Q15434	407 aa	Known RBP	5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	NPY5R	Q15761	445 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	C10orf25	Q5T742	122 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	ANO7	Q6IWH7	933 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	DCDC5	Q6ZRR9	648 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	KCTD20	Q7Z5Y7	419 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	SKAP1	Q86WV1	359 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	CHPF	Q8IZ52	775 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	KIAA0319L	Q8IZA0	1049 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	LINC01465	Q8N7H1	131 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	NRAC	Q8N912	160 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms