RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 CD4P01730 458 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 HOXD8P13378 290 aaPredicted RBP11.61□□□□□ -0.55
CHMP3-209ENST00000494623 GOT1P17174 413 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 BMPR2Q13873 1038 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 SLC45A4Q5BKX6 768 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 WLSQ5T9L3 541 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 SH2D5Q6ZV89 423 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 SLC26A9Q7LBE3 791 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 CCDC91Q7Z6B0 441 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 FAM131BQ86XD5 332 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 CRYBG2Q8N1P7 616 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 APPL2Q8NEU8 664 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 CENPIQ92674 756 aaPredicted RBP11.61□□□□□ -0.55
CHMP3-209ENST00000494623 FAM149B1Q96BN6 582 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 CSPG4P5Q96PW8 444 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 TSSK1BQ9BXA7 367 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 FRMD8Q9BZ67 464 aaPredicted RBP11.61□□□□□ -0.55
CHMP3-209ENST00000494623 SLC13A1Q9BZW2 595 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 IQCGQ9H095 443 aaKnown RBP11.61□□□□□ -0.55
CHMP3-209ENST00000494623 PLAC1Q9HBJ0 212 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.61□□□□□ -0.55
CHMP3-209ENST00000494623 ZFP69BQ9UJL9 534 aa11.61□□□□□ -0.55
CHMP3-209ENST00000494623 ZSWIM8A7E2V4 1837 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 ATP5HO75947 161 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 SNRPAP09012 282 aaKnown RBP11.6□□□□□ -0.55
CHMP3-209ENST00000494623 T-ENOLP0DO92 83 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 ZFXP17010 805 aaPredicted RBP11.6□□□□□ -0.55
CHMP3-209ENST00000494623 ETV4P43268 484 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 NEK3P51956 506 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 CDC42EP1Q00587 391 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 UNC5AQ6ZN44 842 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 CDHR3Q6ZTQ4 885 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 DEFB106AQ8N104 65 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 C11orf84Q9BUA3 381 aaPredicted RBP11.6□□□□□ -0.55
CHMP3-209ENST00000494623 TMPRSS4Q9NRS4 437 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 SMIM35A0A1B0GVV1 85 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 TRDMT1O14717 391 aaKnown RBP11.6□□□□□ -0.55
CHMP3-209ENST00000494623 TREHO43280 583 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 GCATO75600 419 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 KRT37O76014 449 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 APOEP02649 317 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 C1QAP02745 245 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 SOX4Q06945 474 aaPredicted RBP11.6□□□□□ -0.55
CHMP3-209ENST00000494623 LGSNQ5TDP6 509 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 HEATR6Q6AI08 1181 aaKnown RBP11.6□□□□□ -0.55
CHMP3-209ENST00000494623 TRMT10BQ6PF06 316 aaKnown RBP11.6□□□□□ -0.55
CHMP3-209ENST00000494623 DENND5BQ6ZUT9 1274 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 UTP4Q969X6 686 aaKnown RBP11.6□□□□□ -0.55
CHMP3-209ENST00000494623 STAMBPL1Q96FJ0 436 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 RAB3IPQ96QF0 476 aaPredicted RBP11.6□□□□□ -0.55
CHMP3-209ENST00000494623 SRPK1Q96SB4 655 aaKnown RBP11.6□□□□□ -0.55
CHMP3-209ENST00000494623 SYT17Q9BSW7 474 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 TRIM55Q9BYV6 548 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 SLC5A4Q9NY91 659 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 DTLQ9NZJ0 730 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 KANSL3Q9P2N6 904 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 NUMBLQ9Y6R0 609 aa11.6□□□□□ -0.55
CHMP3-209ENST00000494623 PLXNB2O15031 1838 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 CLDN5O00501 218 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 C2CD2LO14523 706 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 HUS1O60921 280 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 ACAT1P24752 427 aaKnown RBP11.59□□□□□ -0.55
CHMP3-209ENST00000494623 TKTP29401 623 aaKnown RBP11.59□□□□□ -0.55
CHMP3-209ENST00000494623 TAF6P49848 677 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 SULT1E1P49888 294 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 SNX17Q15036 470 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 ACCSLQ4AC99 568 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 DCAF6Q58WW2 860 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 NCBP2-AS2Q69YL0 99 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 PIGZQ86VD9 579 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 MCUQ8NE86 351 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 SIGLEC10Q96LC7 697 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 LGMNQ99538 433 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 EBNA1BP2Q99848 306 aaKnown RBP11.59□□□□□ -0.55
CHMP3-209ENST00000494623 PIH1D1Q9NWS0 290 aaKnown RBP11.59□□□□□ -0.55
CHMP3-209ENST00000494623 HEY2Q9UBP5 337 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 DHRS4L1P0CG22 281 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 CSH1P0DML2 217 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 CSH2P0DML3 217 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 PRKCHP24723 683 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 ARL4AP40617 200 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 MAGEA6P43360 314 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 ACADSBP45954 432 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 SERPINB4P48594 390 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 NR2C2P49116 596 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 ARFIP2P53365 341 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 PITX1P78337 314 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-209ENST00000494623 MFSD10Q14728 455 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 MROH9Q5TGP6 573 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 ZNF534Q76KX8 674 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 ANKRD23Q86SG2 305 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 ADGRF2Q8IZF7 708 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 TFB1MQ8WVM0 346 aaKnown RBP11.59□□□□□ -0.55
CHMP3-209ENST00000494623 HSFY1Q96LI6 401 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 ZNF560Q96MR9 790 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 CEP41Q9BYV8 373 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 SLC45A1Q9Y2W3 748 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-209ENST00000494623 F2P00734 622 aa11.59□□□□□ -0.55
CHMP3-209ENST00000494623 IGFBP6P24592 240 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms