RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 RNF139Q8WU17 664 aa15.91■□□□□ 0.14
COL27A1-206ENST00000490831 RUBCNQ92622 972 aa15.91■□□□□ 0.14
COL27A1-206ENST00000490831 P2RY11Q96G91 374 aa15.91■□□□□ 0.14
COL27A1-206ENST00000490831 BBS2Q9BXC9 721 aa15.91■□□□□ 0.14
COL27A1-206ENST00000490831 ACP6Q9NPH0 428 aa15.91■□□□□ 0.14
COL27A1-206ENST00000490831 POLR3BQ9NW08 1133 aaPredicted RBP15.91■□□□□ 0.14
COL27A1-206ENST00000490831 EBF1Q9UH73 591 aa15.91■□□□□ 0.14
COL27A1-206ENST00000490831 STOML2Q9UJZ1 356 aa15.91■□□□□ 0.14
COL27A1-206ENST00000490831 DNAJC12Q9UKB3 198 aa15.91■□□□□ 0.14
COL27A1-206ENST00000490831 AGO1Q9UL18 857 aaKnown RBP15.91■□□□□ 0.14
COL27A1-206ENST00000490831 MMP17Q9ULZ9 603 aa15.91■□□□□ 0.14
COL27A1-206ENST00000490831 PCDHGC3Q9UN70 934 aa15.91■□□□□ 0.14
COL27A1-206ENST00000490831 ANTXRLA6NF34 631 aa15.9■□□□□ 0.14
COL27A1-206ENST00000490831 NEDD8-MDP1E9PL57 170 aa15.9■□□□□ 0.14
COL27A1-206ENST00000490831 SART1O43290 800 aaKnown RBP15.9■□□□□ 0.14
COL27A1-206ENST00000490831 THAP12O43422 761 aa15.9■□□□□ 0.14
COL27A1-206ENST00000490831 LATS1O95835 1130 aa15.9■□□□□ 0.14
COL27A1-206ENST00000490831 LTFP02788 710 aa15.9■□□□□ 0.14
COL27A1-206ENST00000490831 TYRP14679 529 aa15.9■□□□□ 0.14
COL27A1-206ENST00000490831 KDSRQ06136 332 aa15.9■□□□□ 0.14
COL27A1-206ENST00000490831 CCDC183Q5T5S1 534 aa15.9■□□□□ 0.14
COL27A1-206ENST00000490831 TPGS1Q6ZTW0 290 aa15.9■□□□□ 0.14
COL27A1-206ENST00000490831 TMEM110Q86TL2 294 aa15.9■□□□□ 0.14
COL27A1-206ENST00000490831 FMNL3Q8IVF7 1028 aa15.9■□□□□ 0.14
COL27A1-206ENST00000490831 FAM71AQ8IYT1 594 aa15.9■□□□□ 0.14
COL27A1-206ENST00000490831 NAT16Q8N8M0 369 aa15.9■□□□□ 0.14
COL27A1-206ENST00000490831 IL17RCQ8NAC3 791 aa15.9■□□□□ 0.14
COL27A1-206ENST00000490831 CLEC4CQ8WTT0 213 aa15.9■□□□□ 0.14
COL27A1-206ENST00000490831 EDEM1Q92611 657 aa15.9■□□□□ 0.14
COL27A1-206ENST00000490831 XPO6Q96QU8 1125 aaKnown RBP15.9■□□□□ 0.14
COL27A1-206ENST00000490831 ANO10Q9NW15 660 aa15.9■□□□□ 0.14
COL27A1-206ENST00000490831 CYTH4Q9UIA0 394 aa15.9■□□□□ 0.14
COL27A1-206ENST00000490831 STARD13Q9Y3M8 1113 aa15.9■□□□□ 0.14
COL27A1-206ENST00000490831 FOXN3O00409 490 aaPredicted RBP15.89■□□□□ 0.13
COL27A1-206ENST00000490831 GFRA2O00451 464 aa15.89■□□□□ 0.13
COL27A1-206ENST00000490831 APBB3O95704 486 aa15.89■□□□□ 0.13
COL27A1-206ENST00000490831 IGLV3-27P01718 113 aa15.89■□□□□ 0.13
COL27A1-206ENST00000490831 FYNP06241 537 aa15.89■□□□□ 0.13
COL27A1-206ENST00000490831 HMBSP08397 361 aa15.89■□□□□ 0.13
COL27A1-206ENST00000490831 CISD3P0C7P0 127 aa15.89■□□□□ 0.13
COL27A1-206ENST00000490831 CLCN1P35523 988 aa15.89■□□□□ 0.13
COL27A1-206ENST00000490831 SEC13P55735 322 aa15.89■□□□□ 0.13
COL27A1-206ENST00000490831 STX1AQ16623 288 aa15.89■□□□□ 0.13
COL27A1-206ENST00000490831 C2orf27AQ580R0 203 aa15.89■□□□□ 0.13
COL27A1-206ENST00000490831 KLHDC7AQ5VTJ3 777 aa15.89■□□□□ 0.13
COL27A1-206ENST00000490831 FYB2Q5VWT5 728 aa15.89■□□□□ 0.13
COL27A1-206ENST00000490831 HEATR6Q6AI08 1181 aaKnown RBP15.89■□□□□ 0.13
COL27A1-206ENST00000490831 GRAMD4Q6IC98 578 aa15.89■□□□□ 0.13
COL27A1-206ENST00000490831 SASS6Q6UVJ0 657 aa15.89■□□□□ 0.13
COL27A1-206ENST00000490831 C11orf57Q6ZUT1 292 aaPredicted RBP15.89■□□□□ 0.13
COL27A1-206ENST00000490831 NUDT18Q6ZVK8 323 aa15.89■□□□□ 0.13
COL27A1-206ENST00000490831 DENND1CQ8IV53 801 aa15.89■□□□□ 0.13
COL27A1-206ENST00000490831 HHIPQ96QV1 700 aa15.89■□□□□ 0.13
COL27A1-206ENST00000490831 NAA15Q9BXJ9 866 aaKnown RBP15.89■□□□□ 0.13
COL27A1-206ENST00000490831 LHX5Q9H2C1 402 aa15.89■□□□□ 0.13
COL27A1-206ENST00000490831 DNAJC17Q9NVM6 304 aaKnown RBP15.89■□□□□ 0.13
COL27A1-206ENST00000490831 SFMBT1Q9UHJ3 866 aa15.89■□□□□ 0.13
COL27A1-206ENST00000490831 TBC1D3BA6NDS4 549 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 PIK3R2O00459 728 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 TRIM24O15164 1050 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 PAPSS1O43252 624 aaPredicted RBP15.88■□□□□ 0.13
COL27A1-206ENST00000490831 USP8P40818 1118 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 HARS2P49590 506 aaKnown RBP15.88■□□□□ 0.13
COL27A1-206ENST00000490831 PTK2Q05397 1052 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 RING1Q06587 406 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 PDCLQ13371 301 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 NNTQ13423 1086 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 CRY1Q16526 586 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 EMC10Q5UCC4 262 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 LAIR1Q6GTX8 287 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 RASSF3Q86WH2 238 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 SCUBE3Q8IX30 993 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 WDTC1Q8N5D0 677 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 ALLCQ8N6M5 410 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 GAB3Q8WWW8 586 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 GOLGA1Q92805 767 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 MIS12Q9H081 205 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 PLCB1Q9NQ66 1216 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 ST7Q9NRC1 585 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 HCN2Q9UL51 889 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 SLC27A6Q9Y2P4 619 aa15.88■□□□□ 0.13
COL27A1-206ENST00000490831 MYO18AQ92614 2054 aaKnown RBP15.88■□□□□ 0.13
COL27A1-206ENST00000490831 E5RJQ4 531 aa15.87■□□□□ 0.13
COL27A1-206ENST00000490831 AXIN1O15169 862 aa15.87■□□□□ 0.13
COL27A1-206ENST00000490831 ADAM23O75077 832 aa15.87■□□□□ 0.13
COL27A1-206ENST00000490831 KLF8O95600 359 aaPredicted RBP15.87■□□□□ 0.13
COL27A1-206ENST00000490831 UCHL3P15374 230 aa15.87■□□□□ 0.13
COL27A1-206ENST00000490831 TIE1P35590 1138 aa15.87■□□□□ 0.13
COL27A1-206ENST00000490831 PXNP49023 591 aaPredicted RBP15.87■□□□□ 0.13
COL27A1-206ENST00000490831 DGKGP49619 791 aa15.87■□□□□ 0.13
COL27A1-206ENST00000490831 DGKEP52429 567 aa15.87■□□□□ 0.13
COL27A1-206ENST00000490831 BPIFB4P59827 614 aa15.87■□□□□ 0.13
COL27A1-206ENST00000490831 ZNF445P59923 1031 aa15.87■□□□□ 0.13
COL27A1-206ENST00000490831 SRSF5Q13243 272 aaKnown RBP15.87■□□□□ 0.13
COL27A1-206ENST00000490831 SIM2Q14190 667 aaPredicted RBP15.87■□□□□ 0.13
COL27A1-206ENST00000490831 DRAP1Q14919 205 aaPredicted RBP15.87■□□□□ 0.13
COL27A1-206ENST00000490831 KRT31Q15323 416 aa15.87■□□□□ 0.13
COL27A1-206ENST00000490831 EOGTQ5NDL2 527 aa15.87■□□□□ 0.13
COL27A1-206ENST00000490831 C10orf76Q5T2E6 689 aa15.87■□□□□ 0.13
COL27A1-206ENST00000490831 CCDC33Q8N5R6 958 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms