RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 PLAG1Q6DJT9 500 aa4.07□□□□□ -1.76
CBWD1-216ENST00000489272 PPP4R4Q6NUP7 873 aa4.07□□□□□ -1.76
CBWD1-216ENST00000489272 UNC13DQ70J99 1090 aa4.07□□□□□ -1.76
CBWD1-216ENST00000489272 MMP21Q8N119 569 aa4.07□□□□□ -1.76
CBWD1-216ENST00000489272 FSTL5Q8N475 847 aaPredicted RBP4.07□□□□□ -1.76
CBWD1-216ENST00000489272 APIPQ96GX9 242 aa4.07□□□□□ -1.76
CBWD1-216ENST00000489272 HPSEQ9Y251 543 aa4.07□□□□□ -1.76
CBWD1-216ENST00000489272 C2CD4BA6NLJ0 364 aa4.06□□□□□ -1.76
CBWD1-216ENST00000489272 MGEA5O60502 916 aa4.06□□□□□ -1.76
CBWD1-216ENST00000489272 SCGB1D2O95969 90 aa4.06□□□□□ -1.76
CBWD1-216ENST00000489272 BTF3P20290 206 aaKnown RBP4.06□□□□□ -1.76
CBWD1-216ENST00000489272 GALNSP34059 522 aa4.06□□□□□ -1.76
CBWD1-216ENST00000489272 NANOS2P60321 138 aaKnown RBP4.06□□□□□ -1.76
CBWD1-216ENST00000489272 WDR5P61964 334 aaKnown RBP4.06□□□□□ -1.76
CBWD1-216ENST00000489272 MANEALQ5VSG8 457 aa4.06□□□□□ -1.76
CBWD1-216ENST00000489272 RNF220Q5VTB9 566 aa4.06□□□□□ -1.76
CBWD1-216ENST00000489272 DARS2Q6PI48 645 aaKnown RBP4.06□□□□□ -1.76
CBWD1-216ENST00000489272 CCDC149Q6ZUS6 474 aa4.06□□□□□ -1.76
CBWD1-216ENST00000489272 SESTD1Q86VW0 696 aa4.06□□□□□ -1.76
CBWD1-216ENST00000489272 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.06□□□□□ -1.76
CBWD1-216ENST00000489272 MBD3L2Q8NHZ7 208 aaPredicted RBP4.06□□□□□ -1.76
CBWD1-216ENST00000489272 IGFBPL1Q8WX77 278 aa4.06□□□□□ -1.76
CBWD1-216ENST00000489272 NLRP4Q96MN2 994 aa4.06□□□□□ -1.76
CBWD1-216ENST00000489272 FCRL5Q96RD9 977 aa4.06□□□□□ -1.76
CBWD1-216ENST00000489272 SCNM1Q9BWG6 230 aa4.06□□□□□ -1.76
CBWD1-216ENST00000489272 TM2D2Q9BX73 214 aa4.06□□□□□ -1.76
CBWD1-216ENST00000489272 SEMA4BQ9NPR2 832 aaPredicted RBP4.06□□□□□ -1.76
CBWD1-216ENST00000489272 ZBTB40Q9NUA8 1239 aa4.06□□□□□ -1.76
CBWD1-216ENST00000489272 TMEM45AQ9NWC5 275 aa4.06□□□□□ -1.76
CBWD1-216ENST00000489272 ZNF212Q9UDV6 495 aa4.06□□□□□ -1.76
CBWD1-216ENST00000489272 COL15A1P39059 1388 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 TTBK1Q5TCY1 1321 aaPredicted RBP4.05□□□□□ -1.76
CBWD1-216ENST00000489272 IGLV5-39A0A0G2JS06 123 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 A6NNZ2 444 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 GOLIM4O00461 696 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 RRHO14718 337 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 WDR47O94967 919 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 TMIGD3P0DMS9 266 aaPredicted RBP4.05□□□□□ -1.76
CBWD1-216ENST00000489272 MYF5P13349 255 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 YY1P25490 414 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 SLC12A2P55011 1212 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 B4GALNT1Q00973 533 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 ERV3-1Q14264 604 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 KIAA0753Q2KHM9 967 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 NXNQ6DKJ4 435 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 ZNF549Q6P9A3 640 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 SRGAP1Q7Z6B7 1085 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 SDR16C5Q8N3Y7 309 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 MAGEB6Q8N7X4 407 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 PIGKQ92643 395 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 TRMT61AQ96FX7 289 aaKnown RBP4.05□□□□□ -1.76
CBWD1-216ENST00000489272 THOC3Q96J01 351 aaKnown RBP4.05□□□□□ -1.76
CBWD1-216ENST00000489272 MSLNLQ96KJ4 702 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 VPS45Q9NRW7 570 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 CAPN11Q9UMQ6 739 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 THRAP3Q9Y2W1 955 aaKnown RBP4.05□□□□□ -1.76
CBWD1-216ENST00000489272 NOTCH2Q04721 2471 aa4.05□□□□□ -1.76
CBWD1-216ENST00000489272 SMAD6O43541 496 aaKnown RBP4.04□□□□□ -1.76
CBWD1-216ENST00000489272 SYF2O95926 243 aaKnown RBP4.04□□□□□ -1.76
CBWD1-216ENST00000489272 HTR7P34969 479 aa4.04□□□□□ -1.76
CBWD1-216ENST00000489272 IL6STP40189 918 aaPredicted RBP4.04□□□□□ -1.76
CBWD1-216ENST00000489272 RAE1P78406 368 aaKnown RBP4.04□□□□□ -1.76
CBWD1-216ENST00000489272 DNASE1L3Q13609 305 aa4.04□□□□□ -1.76
CBWD1-216ENST00000489272 PPP2R5AQ15172 486 aa4.04□□□□□ -1.76
CBWD1-216ENST00000489272 EARS2Q5JPH6 523 aaKnown RBP4.04□□□□□ -1.76
CBWD1-216ENST00000489272 MANEAQ5SRI9 462 aa4.04□□□□□ -1.76
CBWD1-216ENST00000489272 FAM57BQ71RH2 274 aa4.04□□□□□ -1.76
CBWD1-216ENST00000489272 TCEAL8Q8IYN2 117 aa4.04□□□□□ -1.76
CBWD1-216ENST00000489272 FAM156AQ8NDB6 213 aa4.04□□□□□ -1.76
CBWD1-216ENST00000489272 BCAS4Q8TDM0 211 aa4.04□□□□□ -1.76
CBWD1-216ENST00000489272 WIPF2Q8TF74 440 aaPredicted RBP4.04□□□□□ -1.76
CBWD1-216ENST00000489272 SNX22Q96L94 193 aa4.04□□□□□ -1.76
CBWD1-216ENST00000489272 SELENOOQ9BVL4 669 aa4.04□□□□□ -1.76
CBWD1-216ENST00000489272 RNF26Q9BY78 433 aaPredicted RBP4.04□□□□□ -1.76
CBWD1-216ENST00000489272 SLC25A32Q9H2D1 315 aa4.04□□□□□ -1.76
CBWD1-216ENST00000489272 HIPK2Q9H2X6 1198 aa4.04□□□□□ -1.76
CBWD1-216ENST00000489272 SEMA5BQ9P283 1151 aa4.04□□□□□ -1.76
CBWD1-216ENST00000489272 SIRT4Q9Y6E7 314 aaPredicted RBP4.04□□□□□ -1.76
CBWD1-216ENST00000489272 SLC22A23A1A5C7 686 aa4.03□□□□□ -1.76
CBWD1-216ENST00000489272 F8W810 466 aa4.03□□□□□ -1.76
CBWD1-216ENST00000489272 FOXN3O00409 490 aaPredicted RBP4.03□□□□□ -1.76
CBWD1-216ENST00000489272 TPP1O14773 563 aa4.03□□□□□ -1.76
CBWD1-216ENST00000489272 ZBED1O96006 694 aa4.03□□□□□ -1.76
CBWD1-216ENST00000489272 MBPP02686 304 aaPredicted RBP4.03□□□□□ -1.76
CBWD1-216ENST00000489272 MT-ND5P03915 603 aa4.03□□□□□ -1.76
CBWD1-216ENST00000489272 HRGP04196 525 aa4.03□□□□□ -1.76
CBWD1-216ENST00000489272 T-ENOLP0DO92 83 aa4.03□□□□□ -1.76
CBWD1-216ENST00000489272 TNFRSF1BP20333 461 aa4.03□□□□□ -1.76
CBWD1-216ENST00000489272 RPS6KB1P23443 525 aa4.03□□□□□ -1.76
CBWD1-216ENST00000489272 PEX2P28328 305 aa4.03□□□□□ -1.76
CBWD1-216ENST00000489272 ALDH7A1P49419 539 aaKnown RBP4.03□□□□□ -1.76
CBWD1-216ENST00000489272 DGKQP52824 942 aa4.03□□□□□ -1.76
CBWD1-216ENST00000489272 FAM193AP78312 1265 aa4.03□□□□□ -1.76
CBWD1-216ENST00000489272 MTA1Q13330 715 aa4.03□□□□□ -1.76
CBWD1-216ENST00000489272 CNGA3Q16281 694 aa4.03□□□□□ -1.76
CBWD1-216ENST00000489272 NFE2Q16621 373 aaPredicted RBP4.03□□□□□ -1.76
CBWD1-216ENST00000489272 GRHL2Q6ISB3 625 aa4.03□□□□□ -1.76
CBWD1-216ENST00000489272 RBM44Q6ZP01 1051 aaKnown RBP4.03□□□□□ -1.76
CBWD1-216ENST00000489272 TFAP2DQ7Z6R9 452 aa4.03□□□□□ -1.76
CBWD1-216ENST00000489272 RAVER1Q8IY67 606 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms