RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 SLC11A2P49281 568 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 ZNF445P59923 1031 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 PTK2Q05397 1052 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 DMWDQ09019 674 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 SRSF5Q13243 272 aaKnown RBP9.54□□□□□ -0.88
HDAC6-232ENST00000489053 RAPGEF1Q13905 1077 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 KCNJ12Q14500 433 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 STARD3Q14849 445 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 VWA3BQ502W6 1294 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 RAB41Q5JT25 222 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 FKBP15Q5T1M5 1219 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 PM20D1Q6GTS8 502 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 PKN3Q6P5Z2 889 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 UNC45BQ8IWX7 931 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 CHPFQ8IZ52 775 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 ZNF276Q8N554 614 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 DCLK2Q8N568 766 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 UBR7Q8N806 425 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 TERB1Q8NA31 727 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 C12orf50Q8NA57 414 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-232ENST00000489053 KCNV2Q8TDN2 545 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 HMGB4Q8WW32 186 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 TFAP2BQ92481 460 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 PCMTD1Q96MG8 357 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-232ENST00000489053 MED15Q96RN5 788 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 TUBGCP2Q9BSJ2 902 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 NDST4Q9H3R1 872 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 C2orf42Q9NWW7 574 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 PLK2Q9NYY3 685 aa9.54□□□□□ -0.88
HDAC6-232ENST00000489053 CDV3Q9UKY7 258 aaKnown RBP9.54□□□□□ -0.88
HDAC6-232ENST00000489053 TCRBV21S2A2A0A5A6 115 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 YJEFN3A6XGL0 299 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 PRR5-ARHGAP8B1AHC4 643 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 E7ENQ6 273 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 HRO43593 1189 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 CACNG3O60359 315 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 LRP3O75074 770 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 APOEP02649 317 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 LTFP02788 710 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 NCAM1P13591 858 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 HOXB2P14652 356 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 SLC9A1P19634 815 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 CDK11BP21127 795 aaKnown RBP9.53□□□□□ -0.88
HDAC6-232ENST00000489053 EEF1GP26641 437 aaKnown RBP9.53□□□□□ -0.88
HDAC6-232ENST00000489053 ID4P47928 161 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 DAOAP59103 153 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 BPIFB4P59827 614 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 ARHGAP8P85298 464 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 CRY1Q16526 586 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 STX1AQ16623 288 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 MPPE1Q53F39 396 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 NUGGCQ68CJ6 796 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 PMF1Q6P1K2 205 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 C12orf40Q86WS4 652 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 MSANTD4Q8NCY6 345 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 LMO3Q8TAP4 145 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 IPO4Q8TEX9 1081 aaKnown RBP9.53□□□□□ -0.88
HDAC6-232ENST00000489053 NDRG1Q92597 394 aaKnown RBP9.53□□□□□ -0.88
HDAC6-232ENST00000489053 WBP2Q969T9 261 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 KREMEN1Q96MU8 473 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 SERPINB11Q96P15 392 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 TPSD1Q9BZJ3 242 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 CIPCQ9C0C6 399 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 NAT10Q9H0A0 1025 aaKnown RBP9.53□□□□□ -0.88
HDAC6-232ENST00000489053 LMBRD1Q9NUN5 540 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 ANO10Q9NW15 660 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 MARK1Q9P0L2 795 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 EBF1Q9UH73 591 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 AGO1Q9UL18 857 aaKnown RBP9.53□□□□□ -0.88
HDAC6-232ENST00000489053 NFE2L3Q9Y4A8 694 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 COL4A2P08572 1712 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 OTOGLQ3ZCN5 2332 aa9.53□□□□□ -0.88
HDAC6-232ENST00000489053 PTPRDP23468 1912 aa9.52□□□□□ -0.88
HDAC6-232ENST00000489053 RNF225M0QZC1 329 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-232ENST00000489053 MSI1O43347 362 aaKnown RBP9.52□□□□□ -0.89
HDAC6-232ENST00000489053 SYNCRIPO60506 623 aaKnown RBP9.52□□□□□ -0.89
HDAC6-232ENST00000489053 TSPAN3O60637 253 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 CALCAP01258 141 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 PON1P27169 355 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 NTSR1P30989 418 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 WASP42768 502 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 ZNF132P52740 706 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 TBX4P57082 545 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 SPEM2Q0P670 501 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 MEA1Q16626 185 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 GAB4Q2WGN9 574 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 AASDHQ4L235 1098 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-232ENST00000489053 DENND1BQ6P3S1 775 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 GJB7Q6PEY0 223 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 Q6ZNB5 142 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 CLEC17AQ6ZS10 378 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 ANKS1BQ7Z6G8 1248 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 PASD1Q8IV76 773 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 SCUBE3Q8IX30 993 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 ETFBKMTQ8IXQ9 262 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 SCML4Q8N228 414 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 FAM160A2Q8N612 972 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-232ENST00000489053 ZNF557Q8N988 423 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-232ENST00000489053 IL17RCQ8NAC3 791 aa9.52□□□□□ -0.89
HDAC6-232ENST00000489053 SLC35F5Q8WV83 523 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms