RNA–Protein interactions for RNA: ENST00000487704.5

RTCB-205, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-205ENST00000487704 HTR3DQ70Z44 454 aa8.14□□□□□ -1.11
RTCB-205ENST00000487704 C14orf80Q86SX3 495 aa8.14□□□□□ -1.11
RTCB-205ENST00000487704 SPATA2LQ8IUW3 424 aaPredicted RBP8.14□□□□□ -1.11
RTCB-205ENST00000487704 CD302Q8IX05 232 aa8.14□□□□□ -1.11
RTCB-205ENST00000487704 ADGRF2Q8IZF7 708 aa8.14□□□□□ -1.11
RTCB-205ENST00000487704 SLC25A45Q8N413 288 aa8.14□□□□□ -1.11
RTCB-205ENST00000487704 OR2T3Q8NH03 318 aa8.14□□□□□ -1.11
RTCB-205ENST00000487704 OR4C6Q8NH72 309 aa8.14□□□□□ -1.11
RTCB-205ENST00000487704 WDR36Q8NI36 951 aaKnown RBP8.14□□□□□ -1.11
RTCB-205ENST00000487704 ATXN7L3BQ96GX2 97 aa8.14□□□□□ -1.11
RTCB-205ENST00000487704 LHX5Q9H2C1 402 aa8.14□□□□□ -1.11
RTCB-205ENST00000487704 POLD4Q9HCU8 107 aa8.14□□□□□ -1.11
RTCB-205ENST00000487704 DKK3Q9UBP4 350 aa8.14□□□□□ -1.11
RTCB-205ENST00000487704 NAP1L2Q9ULW6 460 aaPredicted RBP8.14□□□□□ -1.11
RTCB-205ENST00000487704 DERAQ9Y315 318 aa8.14□□□□□ -1.11
RTCB-205ENST00000487704 SH3BP1Q9Y3L3 701 aa8.14□□□□□ -1.11
RTCB-205ENST00000487704 RP1L1Q8IWN7 2480 aaPredicted RBP8.14□□□□□ -1.11
RTCB-205ENST00000487704 TP53BP1Q12888 1972 aaPredicted RBP8.13□□□□□ -1.11
RTCB-205ENST00000487704 RNF224P0DH78 156 aa8.13□□□□□ -1.11
RTCB-205ENST00000487704 GSPT1P15170 499 aaKnown RBP8.13□□□□□ -1.11
RTCB-205ENST00000487704 TRAPPC10P48553 1259 aa8.13□□□□□ -1.11
RTCB-205ENST00000487704 VASPP50552 380 aaPredicted RBP8.13□□□□□ -1.11
RTCB-205ENST00000487704 CDH8P55286 799 aa8.13□□□□□ -1.11
RTCB-205ENST00000487704 SRSF6Q13247 344 aaKnown RBP8.13□□□□□ -1.11
RTCB-205ENST00000487704 ZNF234Q14588 700 aa8.13□□□□□ -1.11
RTCB-205ENST00000487704 TGIF1Q15583 401 aa8.13□□□□□ -1.11
RTCB-205ENST00000487704 ENOX2Q16206 610 aaKnown RBP8.13□□□□□ -1.11
RTCB-205ENST00000487704 JADE1Q6IE81 842 aa8.13□□□□□ -1.11
RTCB-205ENST00000487704 CAPRIN2Q6IMN6 1127 aaKnown RBP8.13□□□□□ -1.11
RTCB-205ENST00000487704 B4GALNT3Q6L9W6 998 aa8.13□□□□□ -1.11
RTCB-205ENST00000487704 FAM171BQ6P995 826 aa8.13□□□□□ -1.11
RTCB-205ENST00000487704 BORAQ6PGQ7 559 aa8.13□□□□□ -1.11
RTCB-205ENST00000487704 UCMAQ8WVF2 138 aa8.13□□□□□ -1.11
RTCB-205ENST00000487704 HTR3CQ8WXA8 447 aa8.13□□□□□ -1.11
RTCB-205ENST00000487704 HAPLN2Q9GZV7 340 aa8.13□□□□□ -1.11
RTCB-205ENST00000487704 LSG1Q9H089 658 aaKnown RBP8.13□□□□□ -1.11
RTCB-205ENST00000487704 EBF2Q9HAK2 575 aa8.13□□□□□ -1.11
RTCB-205ENST00000487704 C17orf75Q9HAS0 396 aa8.13□□□□□ -1.11
RTCB-205ENST00000487704 USP29Q9HBJ7 922 aa8.13□□□□□ -1.11
RTCB-205ENST00000487704 AASDHPPTQ9NRN7 309 aa8.13□□□□□ -1.11
RTCB-205ENST00000487704 DDX43Q9NXZ2 648 aaKnown RBP8.13□□□□□ -1.11
RTCB-205ENST00000487704 SNX14Q9Y5W7 946 aa8.13□□□□□ -1.11
RTCB-205ENST00000487704 SCN1AP35498 2009 aa8.13□□□□□ -1.11
RTCB-205ENST00000487704 CKAP5Q14008 2032 aa8.13□□□□□ -1.11
RTCB-205ENST00000487704 WNT9AO14904 365 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 MTSS1O43312 755 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 COCHO43405 550 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 FAM189A1O60320 539 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 GREM1O60565 184 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 SEMA7AO75326 666 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 MED24O75448 989 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 ABL1P00519 1130 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 EPHX1P07099 455 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 LIPCP11150 499 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 PRKCHP24723 683 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 RPA1P27694 616 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 SLC5A2P31639 672 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 POLE2P56282 527 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 CYP4F2P78329 520 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 TAF10Q12962 218 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 STRN3Q13033 797 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 HS1BP3Q53T59 392 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 SLC45A4Q5BKX6 768 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 RSRC2Q7L4I2 434 aaKnown RBP8.12□□□□□ -1.11
RTCB-205ENST00000487704 SPATS2Q86XZ4 545 aaKnown RBP8.12□□□□□ -1.11
RTCB-205ENST00000487704 CACUL1Q86Y37 369 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 SLC34A3Q8N130 599 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 PDCL2Q8N4E4 241 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 MFSD2AQ8NA29 543 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 RBBP8NLQ8NC74 664 aaPredicted RBP8.12□□□□□ -1.11
RTCB-205ENST00000487704 NANOS1Q8WY41 292 aaKnown RBP8.12□□□□□ -1.11
RTCB-205ENST00000487704 SLITRK1Q96PX8 696 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 GZF1Q9H116 711 aaPredicted RBP8.12□□□□□ -1.11
RTCB-205ENST00000487704 OSBPL2Q9H1P3 480 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 FBRSQ9HAH7 460 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 KMT5AQ9NQR1 393 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.12□□□□□ -1.111e-6■■■■■ 38.5
RTCB-205ENST00000487704 ELOVL2Q9NXB9 296 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 DONSONQ9NYP3 566 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 SEPT10Q9P0V9 454 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 TPX2Q9ULW0 747 aaKnown RBP8.12□□□□□ -1.11
RTCB-205ENST00000487704 MED13LQ71F56 2210 aa8.12□□□□□ -1.11
RTCB-205ENST00000487704 PTPRJQ12913 1337 aa8.11□□□□□ -1.11
RTCB-205ENST00000487704 NIPBLQ6KC79 2804 aaeCLIP8.11□□□□□ -1.11
RTCB-205ENST00000487704 PMS2P1A4D2B8 440 aa8.11□□□□□ -1.11
RTCB-205ENST00000487704 TIMM44O43615 452 aa8.11□□□□□ -1.11
RTCB-205ENST00000487704 TCEA3O75764 348 aa8.11□□□□□ -1.11
RTCB-205ENST00000487704 CLDN1O95832 211 aa8.11□□□□□ -1.11
RTCB-205ENST00000487704 GIMD1P0DJR0 217 aa8.11□□□□□ -1.11
RTCB-205ENST00000487704 TGM2P21980 687 aa8.11□□□□□ -1.11
RTCB-205ENST00000487704 MUTP22033 750 aa8.11□□□□□ -1.11
RTCB-205ENST00000487704 ACAT1P24752 427 aaKnown RBP8.11□□□□□ -1.11
RTCB-205ENST00000487704 TXKP42681 527 aa8.11□□□□□ -1.11
RTCB-205ENST00000487704 TUBP50607 506 aa8.11□□□□□ -1.11
RTCB-205ENST00000487704 GALCP54803 685 aa8.11□□□□□ -1.11
RTCB-205ENST00000487704 MFAP3P55082 362 aa8.11□□□□□ -1.11
RTCB-205ENST00000487704 RPS14P62263 151 aaKnown RBP8.11□□□□□ -1.11
RTCB-205ENST00000487704 OVGP1Q12889 678 aa8.11□□□□□ -1.11
RTCB-205ENST00000487704 KCNJ12Q14500 433 aa8.11□□□□□ -1.11
RTCB-205ENST00000487704 TMEM132DQ14C87 1099 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms