RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 P3H4Q92791 437 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 NKD2Q969F2 451 aaPredicted RBP7.33□□□□□ -1.24
SF3A3-206ENST00000487062 NTAN1Q96AB6 310 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 TRIM43Q96BQ3 446 aaPredicted RBP7.33□□□□□ -1.24
SF3A3-206ENST00000487062 HAUS1Q96CS2 278 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 PGAP3Q96FM1 320 aaPredicted RBP7.33□□□□□ -1.24
SF3A3-206ENST00000487062 SNF8Q96H20 258 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 TMEM169Q96HH4 297 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 IGSF21Q96ID5 467 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 RNF157Q96PX1 679 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 FMO2Q99518 471 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 RHOBTB2Q9BYZ6 727 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 TRIM31Q9BZY9 425 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 TSPYL1Q9H0U9 437 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 DHX35Q9H5Z1 703 aaKnown RBP7.33□□□□□ -1.24
SF3A3-206ENST00000487062 CWH43Q9H720 699 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 FAM204AQ9H8W3 233 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 PCDH18Q9HCL0 1135 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 IL23AQ9NPF7 189 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 AAASQ9NRG9 546 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 TMEM30AQ9NV96 361 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 GPATCH2LQ9NWQ4 482 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 COMMD8Q9NX08 183 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 OGFRQ9NZT2 677 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 WHRNQ9P202 907 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 RCOR3Q9P2K3 495 aaPredicted RBP7.33□□□□□ -1.24
SF3A3-206ENST00000487062 STK39Q9UEW8 545 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 FZD10Q9ULW2 581 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 NAALADL1Q9UQQ1 740 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 R3HDM2Q9Y2K5 976 aaKnown RBP7.33□□□□□ -1.24
SF3A3-206ENST00000487062 SNX24Q9Y343 169 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 KIAA1671Q9BY89 1806 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 ZNF638Q14966 1978 aaKnown RBP7.33□□□□□ -1.24
SF3A3-206ENST00000487062 GREB1Q4ZG55 1949 aa7.33□□□□□ -1.24
SF3A3-206ENST00000487062 COL4A4P53420 1690 aaPredicted RBP7.32□□□□□ -1.24
SF3A3-206ENST00000487062 SYNJ2BP-COX16A0A087WUM0 186 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 MTMR11A4FU01 709 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 CFAP69A5D8W1 941 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 H3BRJ5 948 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 TNFRSF10BO14763 440 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 TBC1D4O60343 1298 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 ZNF189O75820 626 aaPredicted RBP7.32□□□□□ -1.24
SF3A3-206ENST00000487062 KRT14P02533 472 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 CD48P09326 243 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 TFE3P19532 575 aaPredicted RBP7.32□□□□□ -1.24
SF3A3-206ENST00000487062 ITIH2P19823 946 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 L1CAMP32004 1257 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 ACTN2P35609 894 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 PPM1AP35813 382 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 ADCY8P40145 1251 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 RPL21P46778 160 aaKnown RBP7.32□□□□□ -1.24
SF3A3-206ENST00000487062 NR2C2P49116 596 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 CDR1P51861 262 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 RABGGTBP53611 331 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 EIF3EP60228 445 aaKnown RBP7.32□□□□□ -1.24
SF3A3-206ENST00000487062 WDR5P61964 334 aaKnown RBP7.32□□□□□ -1.24
SF3A3-206ENST00000487062 YWHAGP61981 247 aaKnown RBP eCLIP7.32□□□□□ -1.24
SF3A3-206ENST00000487062 OTUD4Q01804 1114 aaKnown RBP7.32□□□□□ -1.24
SF3A3-206ENST00000487062 ADCY2Q08462 1091 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 IFRD2Q12894 506 aaPredicted RBP7.32□□□□□ -1.24
SF3A3-206ENST00000487062 MMRN1Q13201 1228 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 NME3Q13232 169 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 NOMO1Q15155 1222 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 OASLQ15646 514 aaKnown RBP7.32□□□□□ -1.24
SF3A3-206ENST00000487062 PSMD5Q16401 504 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 RAB6CQ53S08 254 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 HSP90B2PQ58FF3 399 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 ZC3H12AQ5D1E8 599 aaKnown RBP7.32□□□□□ -1.24
SF3A3-206ENST00000487062 PPP6R3Q5H9R7 873 aaPredicted RBP7.32□□□□□ -1.24
SF3A3-206ENST00000487062 EFHC2Q5JST6 749 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 SYPL2Q5VXT5 272 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 BSPRYQ5W0U4 402 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 ALS2CLQ60I27 953 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 HFE2Q6ZVN8 426 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 BZW1Q7L1Q6 419 aaKnown RBP7.32□□□□□ -1.24
SF3A3-206ENST00000487062 BNIPLQ7Z465 357 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 MON1AQ86VX9 555 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 KRT222Q8N1A0 295 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 ALLCQ8N6M5 410 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 SLC35B2Q8TB61 432 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 RNF139Q8WU17 664 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 RSAD2Q8WXG1 361 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 RIN2Q8WYP3 895 aaPredicted RBP7.32□□□□□ -1.24
SF3A3-206ENST00000487062 PIK3R5Q8WYR1 880 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 FAF2Q96CS3 445 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 ZNF689Q96CS4 500 aaPredicted RBP7.32□□□□□ -1.24
SF3A3-206ENST00000487062 CEP295NLQ96MC4 621 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 RUFY1Q96T51 708 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 RAB6CQ9H0N0 254 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 DDIT4Q9NX09 232 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.32□□□□□ -1.24
SF3A3-206ENST00000487062 SPG21Q9NZD8 308 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 COX16Q9P0S2 106 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 HCSTQ9UBK5 93 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 MTRRQ9UBK8 725 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 DNPEPQ9ULA0 475 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 HPCAL4Q9UM19 191 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 SCML2Q9UQR0 700 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 BACE2Q9Y5Z0 518 aa7.32□□□□□ -1.24
SF3A3-206ENST00000487062 PTPRSQ13332 1948 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms