RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 LRRC19Q9H756 370 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 PPCSQ9HAB8 311 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 EPS15L1Q9UBC2 864 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 TUBGCP4Q9UGJ1 667 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 DUSP12Q9UNI6 340 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 COQ4Q9Y3A0 265 aa9.44□□□□□ -0.9
COL12A1-208ENST00000486533 TMEM110-MUSTN1A8MSY1 372 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 THAP12O43422 761 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 NARSO43776 548 aaKnown RBP9.43□□□□□ -0.9
COL12A1-208ENST00000486533 PAPLNO95428 1278 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 CLTAP09496 248 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 LAMP2P13473 410 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 COMTP21964 271 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 GARTP22102 1010 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 PTGIRP43119 386 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 GCLMP48507 274 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 SEC24CP53992 1094 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 ARPP19P56211 112 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 NTHL1P78549 312 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 GCNT1Q02742 428 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 PTP4A2Q12974 167 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 NR1H3Q13133 447 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 TRADDQ15628 312 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 SNCBQ16143 134 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 DCAF12L1Q5VU92 463 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 ACAD10Q6JQN1 1059 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 RSPO2Q6UXX9 243 aaPredicted RBP9.43□□□□□ -0.9
COL12A1-208ENST00000486533 MAP4K3Q8IVH8 894 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 CCDC13Q8IYE1 715 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 SIX5Q8N196 739 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 PPM1KQ8N3J5 372 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 ST13P5Q8NFI4 369 aaPredicted RBP9.43□□□□□ -0.9
COL12A1-208ENST00000486533 EPS8L1Q8TE68 723 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 ART4Q93070 314 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 SNF8Q96H20 258 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 NUP85Q9BW27 656 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 HAPLN2Q9GZV7 340 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 RABEP2Q9H5N1 569 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 PLEKHA5Q9HAU0 1116 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 TBX20Q9UMR3 447 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 SNX24Q9Y343 169 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 BACE2Q9Y5Z0 518 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 SCINQ9Y6U3 715 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 DMDP11532 3685 aa9.43□□□□□ -0.9
COL12A1-208ENST00000486533 ANKRD65E5RJM6 399 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 PRRG1O14668 218 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 SYN3O14994 580 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 CFHP08603 1231 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 EZRP15311 586 aaKnown RBP9.42□□□□□ -0.9
COL12A1-208ENST00000486533 DRD4P21917 467 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 HOXA9P31269 272 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 ELF1P32519 619 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 TNFSF9P41273 254 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 ROR1Q01973 937 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 ZNF211Q13398 564 aaPredicted RBP9.42□□□□□ -0.9
COL12A1-208ENST00000486533 SNRNP35Q16560 246 aaKnown RBP9.42□□□□□ -0.9
COL12A1-208ENST00000486533 SGO2Q562F6 1265 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 ANKRD20A8PQ5CZ79 823 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 WDR44Q5JSH3 913 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 SLC44A3Q8N4M1 653 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 TMEM105Q8N8V8 129 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 PRELID2Q8N945 189 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 OLIG1Q8TAK6 271 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 SLC20A1Q8WUM9 679 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 CD101Q93033 1021 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 GRAMD1AQ96CP6 724 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 MSTO1Q9BUK6 570 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 MRPL47Q9HD33 250 aaKnown RBP9.42□□□□□ -0.9
COL12A1-208ENST00000486533 KLC4Q9NSK0 619 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 NOCTQ9UK39 431 aaKnown RBP9.42□□□□□ -0.9
COL12A1-208ENST00000486533 WDR87Q6ZQQ6 2873 aa9.42□□□□□ -0.9
COL12A1-208ENST00000486533 ZFHX2Q9C0A1 2572 aaPredicted RBP9.42□□□□□ -0.9
COL12A1-208ENST00000486533 CCT8L1PA6NM43 557 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 H7C4K7 107 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 OGTO15294 1046 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 RIPK2O43353 540 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 PSTPIP1O43586 416 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 LRG1P02750 347 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 ATF2P15336 505 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 CYP11B1P15538 503 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 CHN1P15882 459 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 PEX5P50542 639 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 PPP3CAQ08209 521 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 TCF15Q12870 199 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 PTK6Q13882 451 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 KYAT1Q16773 422 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 CTXN3Q4LDR2 81 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 PABPC1LQ4VXU2 614 aaKnown RBP9.41□□□□□ -0.9
COL12A1-208ENST00000486533 ZBTB41Q5SVQ8 909 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 SLC8B1Q6J4K2 584 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 ZNF280DQ6N043 979 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 ZDHHC24Q6UX98 284 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 PPP1R21Q6ZMI0 780 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 ARHGEF19Q8IW93 802 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 GPD1LQ8N335 351 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 CCDC89Q8N998 374 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 RDH13Q8NBN7 331 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 APPL2Q8NEU8 664 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 ZNF461Q8TAF7 563 aa9.41□□□□□ -0.9
COL12A1-208ENST00000486533 FBXO25Q8TCJ0 367 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms