RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 EEF1GP26641 437 aaKnown RBP6.17□□□□□ -1.42
LTN1-206ENST00000486427 ATP1A4Q13733 1029 aa6.17□□□□□ -1.42
LTN1-206ENST00000486427 MPEG1Q2M385 716 aa6.17□□□□□ -1.42
LTN1-206ENST00000486427 TMEM196Q5HYL7 178 aa6.17□□□□□ -1.42
LTN1-206ENST00000486427 CCDC181Q5TID7 509 aa6.17□□□□□ -1.42
LTN1-206ENST00000486427 MEX3CQ5U5Q3 659 aaKnown RBP6.17□□□□□ -1.42
LTN1-206ENST00000486427 MORN5Q5VZ52 161 aa6.17□□□□□ -1.42
LTN1-206ENST00000486427 FAM90A2PQ658T7 463 aa6.17□□□□□ -1.42
LTN1-206ENST00000486427 CCSAPQ6IQ19 270 aaPredicted RBP6.17□□□□□ -1.42
LTN1-206ENST00000486427 VSTM1Q6UX27 236 aa6.17□□□□□ -1.42
LTN1-206ENST00000486427 MAP4K1Q92918 833 aa6.17□□□□□ -1.42
LTN1-206ENST00000486427 ZNF566Q969W8 418 aa6.17□□□□□ -1.42
LTN1-206ENST00000486427 CERS4Q9HA82 394 aa6.17□□□□□ -1.42
LTN1-206ENST00000486427 SEMA5BQ9P283 1151 aa6.17□□□□□ -1.42
LTN1-206ENST00000486427 ZSCAN9O15535 394 aaPredicted RBP6.16□□□□□ -1.42
LTN1-206ENST00000486427 IDEP14735 1019 aa6.16□□□□□ -1.42
LTN1-206ENST00000486427 ATP5F1P24539 256 aaPredicted RBP6.16□□□□□ -1.42
LTN1-206ENST00000486427 LMO1P25800 156 aa6.16□□□□□ -1.42
LTN1-206ENST00000486427 HSPA7P48741 367 aa6.16□□□□□ -1.42
LTN1-206ENST00000486427 DGKQP52824 942 aa6.16□□□□□ -1.42
LTN1-206ENST00000486427 MAPKAPK3Q16644 382 aa6.16□□□□□ -1.42
LTN1-206ENST00000486427 TMEM63BQ5T3F8 832 aa6.16□□□□□ -1.42
LTN1-206ENST00000486427 SRLQ86TD4 932 aa6.16□□□□□ -1.42
LTN1-206ENST00000486427 KRT73Q86Y46 540 aa6.16□□□□□ -1.42
LTN1-206ENST00000486427 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.16□□□□□ -1.42
LTN1-206ENST00000486427 OSR1Q8TAX0 266 aaPredicted RBP6.16□□□□□ -1.42
LTN1-206ENST00000486427 C18orf8Q96DM3 657 aa6.16□□□□□ -1.42
LTN1-206ENST00000486427 HIC2Q96JB3 615 aa6.16□□□□□ -1.42
LTN1-206ENST00000486427 SGCZQ96LD1 299 aa6.16□□□□□ -1.42
LTN1-206ENST00000486427 MYD88Q99836 296 aa6.16□□□□□ -1.42
LTN1-206ENST00000486427 CINPQ9BW66 212 aaPredicted RBP6.16□□□□□ -1.42
LTN1-206ENST00000486427 EIF2AQ9BY44 585 aaKnown RBP6.16□□□□□ -1.42
LTN1-206ENST00000486427 VPS4AQ9UN37 437 aa6.16□□□□□ -1.42
LTN1-206ENST00000486427 C16orf96A6NNT2 1141 aa6.15□□□□□ -1.42
LTN1-206ENST00000486427 PODXLO00592 558 aa6.15□□□□□ -1.42
LTN1-206ENST00000486427 DHHO43323 396 aa6.15□□□□□ -1.42
LTN1-206ENST00000486427 BFSP2Q13515 415 aa6.15□□□□□ -1.42
LTN1-206ENST00000486427 ETFDHQ16134 617 aa6.15□□□□□ -1.42
LTN1-206ENST00000486427 CC2D1BQ5T0F9 858 aaKnown RBP6.15□□□□□ -1.42
LTN1-206ENST00000486427 ZNF425Q6IV72 752 aa6.15□□□□□ -1.42
LTN1-206ENST00000486427 GRAMD1AQ96CP6 724 aa6.15□□□□□ -1.42
LTN1-206ENST00000486427 FAM118BQ9BPY3 351 aa6.15□□□□□ -1.42
LTN1-206ENST00000486427 ADGRE3Q9BY15 652 aa6.15□□□□□ -1.42
LTN1-206ENST00000486427 E5RJQ4 531 aa6.14□□□□□ -1.43
LTN1-206ENST00000486427 DSCR3O14972 297 aa6.14□□□□□ -1.43
LTN1-206ENST00000486427 ABCB4P21439 1286 aa6.14□□□□□ -1.43
LTN1-206ENST00000486427 JAK3P52333 1124 aa6.14□□□□□ -1.43
LTN1-206ENST00000486427 WDR5P61964 334 aaKnown RBP6.14□□□□□ -1.43
LTN1-206ENST00000486427 YPEL5P62699 121 aa6.14□□□□□ -1.43
LTN1-206ENST00000486427 NSUN2Q08J23 767 aaKnown RBP eCLIP6.14□□□□□ -1.43
LTN1-206ENST00000486427 KPNB1Q14974 876 aaKnown RBP6.14□□□□□ -1.43
LTN1-206ENST00000486427 Q4G0T1 1027 aa6.14□□□□□ -1.43
LTN1-206ENST00000486427 FBXO38Q6PIJ6 1188 aa6.14□□□□□ -1.43
LTN1-206ENST00000486427 PIK3AP1Q6ZUJ8 805 aa6.14□□□□□ -1.43
LTN1-206ENST00000486427 CLASRPQ8N2M8 674 aaKnown RBP6.14□□□□□ -1.43
LTN1-206ENST00000486427 RPL36ALQ969Q0 106 aaKnown RBP6.14□□□□□ -1.43
LTN1-206ENST00000486427 FSCN3Q9NQT6 498 aa6.14□□□□□ -1.43
LTN1-206ENST00000486427 ABHD10Q9NUJ1 306 aa6.14□□□□□ -1.43
LTN1-206ENST00000486427 M0QZQ0 153 aa6.13□□□□□ -1.43
LTN1-206ENST00000486427 RRHO14718 337 aa6.13□□□□□ -1.43
LTN1-206ENST00000486427 RNF8O76064 485 aa6.13□□□□□ -1.43
LTN1-206ENST00000486427 TOP3BO95985 862 aaKnown RBP6.13□□□□□ -1.43
LTN1-206ENST00000486427 VIPP01282 170 aa6.13□□□□□ -1.43
LTN1-206ENST00000486427 SRGAP2BP0DMP2 458 aa6.13□□□□□ -1.43
LTN1-206ENST00000486427 GAB1Q13480 694 aa6.13□□□□□ -1.43
LTN1-206ENST00000486427 RAB30Q15771 203 aa6.13□□□□□ -1.43
LTN1-206ENST00000486427 C11orf87Q6NUJ2 197 aa6.13□□□□□ -1.43
LTN1-206ENST00000486427 TLDC1Q6P9B6 456 aa6.13□□□□□ -1.43
LTN1-206ENST00000486427 DEPTORQ8TB45 409 aa6.13□□□□□ -1.43
LTN1-206ENST00000486427 IGFBPL1Q8WX77 278 aa6.13□□□□□ -1.43
LTN1-206ENST00000486427 SMG7Q92540 1137 aaKnown RBP6.13□□□□□ -1.43
LTN1-206ENST00000486427 TNIP3Q96KP6 325 aa6.13□□□□□ -1.43
LTN1-206ENST00000486427 SPRTNQ9H040 489 aaPredicted RBP6.13□□□□□ -1.43
LTN1-206ENST00000486427 DTNAQ9Y4J8 743 aa6.13□□□□□ -1.43
LTN1-206ENST00000486427 CEP83Q9Y592 693 aa6.13□□□□□ -1.43
LTN1-206ENST00000486427 CCDC187A0A096LP49 1063 aa6.12□□□□□ -1.43
LTN1-206ENST00000486427 ADAM10O14672 748 aa6.12□□□□□ -1.43
LTN1-206ENST00000486427 PLA2G6O60733 806 aa6.12□□□□□ -1.43
LTN1-206ENST00000486427 ALADP13716 330 aa6.12□□□□□ -1.43
LTN1-206ENST00000486427 SEMA3BQ13214 749 aa6.12□□□□□ -1.43
LTN1-206ENST00000486427 SPATA31A1Q5TZJ5 1347 aa6.12□□□□□ -1.43
LTN1-206ENST00000486427 CCDC144NLQ6NUI1 221 aa6.12□□□□□ -1.43
LTN1-206ENST00000486427 XRRA1Q6P2D8 792 aa6.12□□□□□ -1.43
LTN1-206ENST00000486427 TFAP2DQ7Z6R9 452 aa6.12□□□□□ -1.43
LTN1-206ENST00000486427 SVIPQ8NHG7 77 aa6.12□□□□□ -1.43
LTN1-206ENST00000486427 IPO4Q8TEX9 1081 aaKnown RBP6.12□□□□□ -1.43
LTN1-206ENST00000486427 GJA10Q969M2 543 aa6.12□□□□□ -1.43
LTN1-206ENST00000486427 NUDT22Q9BRQ3 303 aa6.12□□□□□ -1.43
LTN1-206ENST00000486427 STK33Q9BYT3 514 aa6.12□□□□□ -1.43
LTN1-206ENST00000486427 NUAK2Q9H093 628 aa6.12□□□□□ -1.43
LTN1-206ENST00000486427 MLXIPLQ9NP71 852 aa6.12□□□□□ -1.43
LTN1-206ENST00000486427 NECTIN3Q9NQS3 549 aa6.12□□□□□ -1.43
LTN1-206ENST00000486427 RXFP3Q9NSD7 469 aa6.12□□□□□ -1.43
LTN1-206ENST00000486427 IGSF9Q9P2J2 1179 aa6.12□□□□□ -1.43
LTN1-206ENST00000486427 SLC39A10Q9ULF5 831 aa6.12□□□□□ -1.43
LTN1-206ENST00000486427 J3KTA2 159 aa6.11□□□□□ -1.43
LTN1-206ENST00000486427 PCDH17O14917 1159 aa6.11□□□□□ -1.43
LTN1-206ENST00000486427 HOXD9P28356 352 aaPredicted RBP6.11□□□□□ -1.43
LTN1-206ENST00000486427 THBS4P35443 961 aa6.11□□□□□ -1.43
LTN1-206ENST00000486427 IGHMBP2P38935 993 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms