RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 TRIM61Q5EBN2 209 aa18■□□□□ 0.47
SMC4-216ENST00000485645 RAB41Q5JT25 222 aa18■□□□□ 0.47
SMC4-216ENST00000485645 LYSMD4Q5XG99 296 aa18■□□□□ 0.47
SMC4-216ENST00000485645 SLC36A4Q6YBV0 504 aa18■□□□□ 0.47
SMC4-216ENST00000485645 SYT12Q8IV01 421 aa18■□□□□ 0.47
SMC4-216ENST00000485645 ANKRD52Q8NB46 1076 aa18■□□□□ 0.47
SMC4-216ENST00000485645 ACOX2Q99424 681 aa18■□□□□ 0.47
SMC4-216ENST00000485645 NUSAP1Q9BXS6 441 aaKnown RBP18■□□□□ 0.47
SMC4-216ENST00000485645 PLK2Q9NYY3 685 aa18■□□□□ 0.47
SMC4-216ENST00000485645 ANGPTL2Q9UKU9 493 aa18■□□□□ 0.47
SMC4-216ENST00000485645 COQ4Q9Y3A0 265 aa18■□□□□ 0.47
SMC4-216ENST00000485645 CDX4O14627 284 aaPredicted RBP17.99■□□□□ 0.47
SMC4-216ENST00000485645 KLKB1P03952 638 aa17.99■□□□□ 0.47
SMC4-216ENST00000485645 HMBSP08397 361 aa17.99■□□□□ 0.47
SMC4-216ENST00000485645 RPL6Q02878 288 aaKnown RBP17.99■□□□□ 0.47
SMC4-216ENST00000485645 LMAN2Q12907 356 aa17.99■□□□□ 0.47
SMC4-216ENST00000485645 ANKRD40Q6AI12 368 aa17.99■□□□□ 0.47
SMC4-216ENST00000485645 PSAPL1Q6NUJ1 521 aa17.99■□□□□ 0.47
SMC4-216ENST00000485645 RSRC2Q7L4I2 434 aaKnown RBP17.99■□□□□ 0.47
SMC4-216ENST00000485645 ZC3H3Q8IXZ2 948 aaKnown RBP17.99■□□□□ 0.47
SMC4-216ENST00000485645 IPO4Q8TEX9 1081 aaKnown RBP17.99■□□□□ 0.47
SMC4-216ENST00000485645 SMARCE1Q969G3 411 aa17.99■□□□□ 0.47
SMC4-216ENST00000485645 GABRG3Q99928 467 aa17.99■□□□□ 0.47
SMC4-216ENST00000485645 GTPBP4Q9BZE4 634 aaKnown RBP17.99■□□□□ 0.47
SMC4-216ENST00000485645 TMEM74BQ9NUR3 256 aa17.99■□□□□ 0.47
SMC4-216ENST00000485645 CALCOCO1Q9P1Z2 691 aa17.99■□□□□ 0.47
SMC4-216ENST00000485645 FBXO10Q9UK96 956 aa17.99■□□□□ 0.47
SMC4-216ENST00000485645 STRIP2Q9ULQ0 834 aa17.99■□□□□ 0.47
SMC4-216ENST00000485645 PI4KAP42356 2102 aa17.98■□□□□ 0.47
SMC4-216ENST00000485645 GFRA2O00451 464 aa17.98■□□□□ 0.47
SMC4-216ENST00000485645 ZNF217O75362 1048 aa17.98■□□□□ 0.47
SMC4-216ENST00000485645 ZBED1O96006 694 aa17.98■□□□□ 0.47
SMC4-216ENST00000485645 CORO1AP31146 461 aaKnown RBP17.98■□□□□ 0.47
SMC4-216ENST00000485645 NOVA1P51513 510 aaKnown RBP17.98■□□□□ 0.47
SMC4-216ENST00000485645 TKTL1P51854 596 aa17.98■□□□□ 0.47
SMC4-216ENST00000485645 PMS1P54277 932 aaKnown RBP17.98■□□□□ 0.47
SMC4-216ENST00000485645 YWHAGP61981 247 aaKnown RBP eCLIP17.98■□□□□ 0.47
SMC4-216ENST00000485645 YWHAEP62258 255 aaKnown RBP17.98■□□□□ 0.47
SMC4-216ENST00000485645 LRRC63Q05C16 580 aa17.98■□□□□ 0.47
SMC4-216ENST00000485645 CUL2Q13617 745 aa17.98■□□□□ 0.47
SMC4-216ENST00000485645 GOLGA7BQ2TAP0 167 aa17.98■□□□□ 0.47
SMC4-216ENST00000485645 SGO2Q562F6 1265 aa17.98■□□□□ 0.47
SMC4-216ENST00000485645 FYB2Q5VWT5 728 aa17.98■□□□□ 0.47
SMC4-216ENST00000485645 ENGASEQ8NFI3 743 aa17.98■□□□□ 0.47
SMC4-216ENST00000485645 SPATA20Q8TB22 786 aa17.98■□□□□ 0.47
SMC4-216ENST00000485645 CD248Q9HCU0 757 aa17.98■□□□□ 0.47
SMC4-216ENST00000485645 CACNA2D2Q9NY47 1150 aa17.98■□□□□ 0.47
SMC4-216ENST00000485645 MARCH2Q9P0N8 246 aa17.98■□□□□ 0.47
SMC4-216ENST00000485645 ARMCX3Q9UH62 379 aaPredicted RBP17.98■□□□□ 0.47
SMC4-216ENST00000485645 HOOK1Q9UJC3 728 aaKnown RBP17.98■□□□□ 0.47
SMC4-216ENST00000485645 TSPAN16Q9UKR8 245 aa17.98■□□□□ 0.47
SMC4-216ENST00000485645 CHD8Q9HCK8 2581 aa17.98■□□□□ 0.47
SMC4-216ENST00000485645 SLC12A8A0AV02 714 aa17.97■□□□□ 0.47
SMC4-216ENST00000485645 XPO1O14980 1071 aaKnown RBP17.97■□□□□ 0.47
SMC4-216ENST00000485645 PENKP01210 267 aaPredicted RBP17.97■□□□□ 0.47
SMC4-216ENST00000485645 NDUFV2P19404 249 aa17.97■□□□□ 0.47
SMC4-216ENST00000485645 ITPKAP23677 461 aa17.97■□□□□ 0.47
SMC4-216ENST00000485645 HOXD12P35452 270 aa17.97■□□□□ 0.47
SMC4-216ENST00000485645 BCAT1P54687 386 aa17.97■□□□□ 0.47
SMC4-216ENST00000485645 UAP1L1Q3KQV9 507 aa17.97■□□□□ 0.47
SMC4-216ENST00000485645 PM20D1Q6GTS8 502 aa17.97■□□□□ 0.47
SMC4-216ENST00000485645 KIAA1211LQ6NV74 962 aa17.97■□□□□ 0.47
SMC4-216ENST00000485645 SLC23A3Q6PIS1 610 aa17.97■□□□□ 0.47
SMC4-216ENST00000485645 DENND1CQ8IV53 801 aa17.97■□□□□ 0.47
SMC4-216ENST00000485645 DEFB119Q8N690 84 aa17.97■□□□□ 0.47
SMC4-216ENST00000485645 ERCC4Q92889 916 aaPredicted RBP17.97■□□□□ 0.47
SMC4-216ENST00000485645 ERLEC1Q96DZ1 483 aa17.97■□□□□ 0.47
SMC4-216ENST00000485645 ULBP1Q9BZM6 244 aa17.97■□□□□ 0.47
SMC4-216ENST00000485645 LRRC4Q9HBW1 653 aa17.97■□□□□ 0.47
SMC4-216ENST00000485645 HESX1Q9UBX0 185 aa17.97■□□□□ 0.47
SMC4-216ENST00000485645 PILRBQ9UKJ0 227 aa17.97■□□□□ 0.47
SMC4-216ENST00000485645 AGO1Q9UL18 857 aaKnown RBP17.97■□□□□ 0.47
SMC4-216ENST00000485645 SLC27A6Q9Y2P4 619 aa17.97■□□□□ 0.47
SMC4-216ENST00000485645 TNRC6BQ9UPQ9 1833 aaKnown RBP17.97■□□□□ 0.47
SMC4-216ENST00000485645 ATXN2Q99700 1313 aaKnown RBP17.97■□□□□ 0.47
SMC4-216ENST00000485645 CEP192Q8TEP8 1941 aa17.96■□□□□ 0.47
SMC4-216ENST00000485645 IGHV1OR15-9A0A0B4J2B8 117 aa17.96■□□□□ 0.47
SMC4-216ENST00000485645 TRIM49BA6NDI0 452 aa17.96■□□□□ 0.47
SMC4-216ENST00000485645 CYBBP04839 570 aa17.96■□□□□ 0.47
SMC4-216ENST00000485645 CD19P15391 556 aa17.96■□□□□ 0.47
SMC4-216ENST00000485645 MFAP3P55082 362 aa17.96■□□□□ 0.47
SMC4-216ENST00000485645 NUCB2P80303 420 aa17.96■□□□□ 0.47
SMC4-216ENST00000485645 SHC2P98077 582 aa17.96■□□□□ 0.47
SMC4-216ENST00000485645 PDE4CQ08493 712 aa17.96■□□□□ 0.47
SMC4-216ENST00000485645 BST2Q10589 180 aaKnown RBP17.96■□□□□ 0.47
SMC4-216ENST00000485645 STIM1Q13586 685 aa17.96■□□□□ 0.47
SMC4-216ENST00000485645 SH3PXD2AQ5TCZ1 1133 aa17.96■□□□□ 0.47
SMC4-216ENST00000485645 PEAR1Q5VY43 1037 aaPredicted RBP17.96■□□□□ 0.47
SMC4-216ENST00000485645 CEP76Q8TAP6 659 aa17.96■□□□□ 0.47
SMC4-216ENST00000485645 SLC35C1Q96A29 364 aa17.96■□□□□ 0.47
SMC4-216ENST00000485645 PLD4Q96BZ4 506 aa17.96■□□□□ 0.47
SMC4-216ENST00000485645 P2RY11Q96G91 374 aa17.96■□□□□ 0.47
SMC4-216ENST00000485645 TIGD1Q96MW7 591 aa17.96■□□□□ 0.47
SMC4-216ENST00000485645 METTL14Q9HCE5 456 aaKnown RBP17.96■□□□□ 0.47
SMC4-216ENST00000485645 OLA1Q9NTK5 396 aaKnown RBP17.96■□□□□ 0.47
SMC4-216ENST00000485645 CYP8B1Q9UNU6 501 aa17.96■□□□□ 0.47
SMC4-216ENST00000485645 RAD54BQ9Y620 910 aa17.96■□□□□ 0.47
SMC4-216ENST00000485645 MAP1BP46821 2468 aaKnown RBP17.95■□□□□ 0.46
SMC4-216ENST00000485645 WASH3PC4AMC7 463 aa17.95■□□□□ 0.46
SMC4-216ENST00000485645 TULP2O00295 520 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms