RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 SARGQ9BW04 601 aa3.85□□□□□ -1.79
SFPQ-209ENST00000485454 COLEC11Q9BWP8 271 aa3.85□□□□□ -1.79
SFPQ-209ENST00000485454 MAGEB5Q9BZ81 275 aa3.85□□□□□ -1.79
SFPQ-209ENST00000485454 NUAK2Q9H093 628 aa3.85□□□□□ -1.79
SFPQ-209ENST00000485454 SAP30LQ9HAJ7 183 aa3.85□□□□□ -1.79
SFPQ-209ENST00000485454 MTMR4Q9NYA4 1195 aa3.85□□□□□ -1.79
SFPQ-209ENST00000485454 CHPF2Q9P2E5 772 aa3.85□□□□□ -1.79
SFPQ-209ENST00000485454 MYO1AQ9UBC5 1043 aa3.85□□□□□ -1.79
SFPQ-209ENST00000485454 FAM50BQ9Y247 325 aa3.85□□□□□ -1.79
SFPQ-209ENST00000485454 A0A1W2PPC4 97 aa3.84□□□□□ -1.79
SFPQ-209ENST00000485454 KIF3BO15066 747 aa3.84□□□□□ -1.79
SFPQ-209ENST00000485454 TLR2O60603 784 aa3.84□□□□□ -1.79
SFPQ-209ENST00000485454 SLC5A1P13866 664 aa3.84□□□□□ -1.79
SFPQ-209ENST00000485454 SLC5A2P31639 672 aa3.84□□□□□ -1.79
SFPQ-209ENST00000485454 THBS4P35443 961 aa3.84□□□□□ -1.79
SFPQ-209ENST00000485454 STT3AP46977 705 aa3.84□□□□□ -1.79
SFPQ-209ENST00000485454 PRIM2P49643 509 aa3.84□□□□□ -1.79
SFPQ-209ENST00000485454 CCT4P50991 539 aaKnown RBP3.84□□□□□ -1.79
SFPQ-209ENST00000485454 WDR5P61964 334 aaKnown RBP3.84□□□□□ -1.79
SFPQ-209ENST00000485454 RPS13P62277 151 aaKnown RBP3.84□□□□□ -1.79
SFPQ-209ENST00000485454 IFIT5Q13325 482 aaKnown RBP3.84□□□□□ -1.79
SFPQ-209ENST00000485454 KPNB1Q14974 876 aaKnown RBP3.84□□□□□ -1.79
SFPQ-209ENST00000485454 MRNIPQ6NTE8 343 aa3.84□□□□□ -1.79
SFPQ-209ENST00000485454 C9orf106Q8NAJ2 232 aa3.84□□□□□ -1.79
SFPQ-209ENST00000485454 C8orf48Q96LL4 319 aa3.84□□□□□ -1.79
SFPQ-209ENST00000485454 WDR24Q96S15 920 aa3.84□□□□□ -1.79
SFPQ-209ENST00000485454 TMEM184CQ9NVA4 438 aa3.84□□□□□ -1.79
SFPQ-209ENST00000485454 ARL8BQ9NVJ2 186 aa3.84□□□□□ -1.79
SFPQ-209ENST00000485454 APOL1O14791 398 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 INPPL1O15357 1258 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 CBFA2T3O75081 653 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 TMEM191BP0C7N4 346 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 CTSAP10619 480 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 PRF1P14222 555 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 IDEP14735 1019 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 MST1P26927 711 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 YPEL5P62699 121 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 RAE1P78406 368 aaKnown RBP3.83□□□□□ -1.8
SFPQ-209ENST00000485454 TWIST1Q15672 202 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 SLC9C1Q4G0N8 1177 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.83□□□□□ -1.8
SFPQ-209ENST00000485454 KIAA0408Q6ZU52 694 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 UBE2Q1Q7Z7E8 422 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 CCDC28AQ8IWP9 274 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 NRACQ8N912 160 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 SNX27Q96L92 541 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 TBCBQ99426 244 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 EIF2AQ9BY44 585 aaKnown RBP3.83□□□□□ -1.8
SFPQ-209ENST00000485454 STARD7Q9NQZ5 370 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 RXFP3Q9NSD7 469 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 GJB4Q9NTQ9 266 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 ABHD10Q9NUJ1 306 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 ZMYND8Q9ULU4 1186 aaPredicted RBP3.83□□□□□ -1.8
SFPQ-209ENST00000485454 VPS4AQ9UN37 437 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 HEMK1Q9Y5R4 338 aaPredicted RBP3.83□□□□□ -1.8
SFPQ-209ENST00000485454 ZMYM2Q9UBW7 1377 aa3.83□□□□□ -1.8
SFPQ-209ENST00000485454 RRHO14718 337 aa3.82□□□□□ -1.8
SFPQ-209ENST00000485454 APAF1O14727 1248 aa3.82□□□□□ -1.8
SFPQ-209ENST00000485454 PMM2O15305 246 aa3.82□□□□□ -1.8
SFPQ-209ENST00000485454 CNOT3O75175 753 aaKnown RBP3.82□□□□□ -1.8
SFPQ-209ENST00000485454 USP12O75317 370 aa3.82□□□□□ -1.8
SFPQ-209ENST00000485454 CD63P08962 238 aa3.82□□□□□ -1.8
SFPQ-209ENST00000485454 TRIM27P14373 513 aa3.82□□□□□ -1.8
SFPQ-209ENST00000485454 DRD1P21728 446 aa3.82□□□□□ -1.8
SFPQ-209ENST00000485454 DUSP1P28562 367 aa3.82□□□□□ -1.8
SFPQ-209ENST00000485454 MAPK7Q13164 816 aa3.82□□□□□ -1.8
SFPQ-209ENST00000485454 STIM1Q13586 685 aa3.82□□□□□ -1.8
SFPQ-209ENST00000485454 HLTFQ14527 1009 aaKnown RBP eCLIP3.82□□□□□ -1.8
SFPQ-209ENST00000485454 CNGA3Q16281 694 aa3.82□□□□□ -1.8
SFPQ-209ENST00000485454 TRIM71Q2Q1W2 868 aaKnown RBP3.82□□□□□ -1.8
SFPQ-209ENST00000485454 ZNF260Q3ZCT1 412 aa3.82□□□□□ -1.8
SFPQ-209ENST00000485454 RAP1GAP2Q684P5 730 aa3.82□□□□□ -1.8
SFPQ-209ENST00000485454 AWAT2Q6E213 333 aa3.82□□□□□ -1.8
SFPQ-209ENST00000485454 TLDC1Q6P9B6 456 aa3.82□□□□□ -1.8
SFPQ-209ENST00000485454 ANKRD13BQ86YJ7 626 aa3.82□□□□□ -1.8
SFPQ-209ENST00000485454 CCAR1Q8IX12 1150 aaKnown RBP3.82□□□□□ -1.8
SFPQ-209ENST00000485454 RNF26Q9BY78 433 aaPredicted RBP3.82□□□□□ -1.8
SFPQ-209ENST00000485454 PCDHAC1Q9H158 963 aa3.82□□□□□ -1.8
SFPQ-209ENST00000485454 PCDHB2Q9Y5E7 798 aa3.82□□□□□ -1.8
SFPQ-209ENST00000485454 TTC3P53804 2025 aa3.82□□□□□ -1.8
SFPQ-209ENST00000485454 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.81□□□□□ -1.8
SFPQ-209ENST00000485454 LY6G6EA0A0G2JKS1 128 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 OR2W5A6NFC9 320 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 C16orf96A6NNT2 1141 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 TTC34A8MYJ7 566 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 ZSCAN9O15535 394 aaPredicted RBP3.81□□□□□ -1.8
SFPQ-209ENST00000485454 PLAUP00749 431 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 CYP19A1P11511 503 aaPredicted RBP3.81□□□□□ -1.8
SFPQ-209ENST00000485454 EGR1P18146 543 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 MATN1P21941 496 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 MMP8P22894 467 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 GABRB3P28472 473 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 IGHMBP2P38935 993 aaKnown RBP3.81□□□□□ -1.8
SFPQ-209ENST00000485454 CPA2P48052 419 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 SRSF1Q07955 248 aaKnown RBP eCLIP3.81□□□□□ -1.81e-6■■■■□ 19.3
SFPQ-209ENST00000485454 SEMA3BQ13214 749 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 BFSP2Q13515 415 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 ATP1A4Q13733 1029 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 SLC5A9Q2M3M2 681 aa3.81□□□□□ -1.8
SFPQ-209ENST00000485454 ARL13BQ3SXY8 428 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms