RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 SPATA31C1P0DKV0 1188 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 FERP16591 822 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 ALOX12P18054 663 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 MC4RP32245 332 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 ARL4CP56559 192 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 ITIH3Q06033 890 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 CNN3Q15417 329 aaKnown RBP5.59□□□□□ -1.51
CCDC39-205ENST00000485055 PTCRAQ6ISU1 281 aaPredicted RBP5.59□□□□□ -1.51
CCDC39-205ENST00000485055 PGBD2Q6P3X8 592 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 MEX3BQ6ZN04 569 aaKnown RBP5.59□□□□□ -1.51
CCDC39-205ENST00000485055 GBP6Q6ZN66 633 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 SYTL1Q8IYJ3 562 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 TNIP2Q8NFZ5 429 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 TMEM174Q8WUU8 243 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 CTNNBL1Q8WYA6 563 aaPredicted RBP5.59□□□□□ -1.51
CCDC39-205ENST00000485055 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.59□□□□□ -1.51
CCDC39-205ENST00000485055 CFAP36Q96G28 342 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 CABS1Q96KC9 395 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 PPP1R13BQ96KQ4 1090 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 NECTIN4Q96NY8 510 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 ZPBPQ9BS86 351 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 GSX2Q9BZM3 304 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 PHACTR1Q9C0D0 580 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 PRDM9Q9NQV7 894 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 ZC3H7BQ9UGR2 993 aaKnown RBP5.59□□□□□ -1.51
CCDC39-205ENST00000485055 EXOC7Q9UPT5 735 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 PCDHGC5Q9Y5F6 944 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 SNX13Q9Y5W8 968 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 AP1M2Q9Y6Q5 423 aa5.59□□□□□ -1.51
CCDC39-205ENST00000485055 NUP210Q8TEM1 1887 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-205ENST00000485055 CHD9Q3L8U1 2897 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 A0A1W2PP55 124 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 RGSL1A5PLK6 1076 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 ATXN7O15265 892 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-205ENST00000485055 PTP4A3O75365 173 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 UBXN7O94888 489 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 TDP2O95551 362 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 SRGAP2BP0DMP2 458 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 ZSCAN22P10073 491 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-205ENST00000485055 PCNAP12004 261 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 ALADP13716 330 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 CPA1P15085 419 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 TECP42680 631 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 MATR3P43243 847 aaKnown RBP eCLIP5.58□□□□□ -1.52
CCDC39-205ENST00000485055 TFDP1Q14186 410 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 AGERQ15109 404 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 PPP1R7Q15435 360 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 TMEM266Q2M3C6 531 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 CLLU1OSQ5K130 101 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 PACS1Q6VY07 963 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 MCPH1Q8NEM0 835 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 DENND1AQ8TEH3 1009 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 ARNTL2Q8WYA1 636 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 CCDC114Q96M63 670 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 ADAM2Q99965 735 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 CNPPD1Q9BV87 410 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 CRLF2Q9HC73 371 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 XPNPEP1Q9NQW7 623 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 SPG21Q9NZD8 308 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 APEX2Q9UBZ4 518 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 CD207Q9UJ71 328 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 MOSPD1Q9UJG1 213 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 ATP23Q9Y6H3 246 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 PATJQ8NI35 1801 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 A0A1B0GUA9 196 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 KHNYNO15037 678 aaKnown RBP5.58□□□□□ -1.52
CCDC39-205ENST00000485055 GRM6O15303 877 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 FFAR2O15552 330 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 KERAO60938 352 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 CRTAMO95727 393 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 SNRNP70P08621 437 aaKnown RBP5.58□□□□□ -1.52
CCDC39-205ENST00000485055 CTSAP10619 480 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 RHOQP17081 205 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 IL11P20809 199 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 DNAJB1P25685 340 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 MAPK3P27361 379 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-205ENST00000485055 HOXA9P31269 272 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 CA8P35219 290 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 IDUAP35475 653 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 MAGEA8P43361 318 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 CENPFP49454 3210 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 SLC26A5P58743 744 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 TBC1D8BQ0IIM8 1120 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 PRPF4BQ13523 1007 aaKnown RBP5.58□□□□□ -1.52
CCDC39-205ENST00000485055 BTG3Q14201 252 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-205ENST00000485055 SSPNQ14714 243 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 SF1Q15637 639 aaKnown RBP5.58□□□□□ -1.52
CCDC39-205ENST00000485055 TCEAL5Q5H9L2 206 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 KRT40Q6A162 431 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 ANKRD54Q6NXT1 300 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 RGS9BPQ6ZS82 235 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 PDCL2Q8N4E4 241 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 MRPL43Q8N983 215 aaKnown RBP5.58□□□□□ -1.52
CCDC39-205ENST00000485055 ARMC2Q8NEN0 867 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 GDPD5Q8WTR4 605 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 CASP10Q92851 521 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 NXPE3Q969Y0 559 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 DHRS1Q96LJ7 313 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 ZNF558Q96NG5 402 aa5.58□□□□□ -1.52
CCDC39-205ENST00000485055 CAPS2Q9BXY5 557 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms