RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 ZNF543Q08ER8 600 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 USP10Q14694 798 aaKnown RBP7.2□□□□□ -1.26
CLK1-212ENST00000482590 USH1GQ495M9 461 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 ATAT1Q5SQI0 421 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 AKNAD1Q5T1N1 836 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 GPATCH4Q5T3I0 446 aaKnown RBP7.2□□□□□ -1.26
CLK1-212ENST00000482590 KCNT2Q6UVM3 1135 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 CCDC149Q6ZUS6 474 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 PDZD4Q76G19 769 aaPredicted RBP7.2□□□□□ -1.26
CLK1-212ENST00000482590 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.2□□□□□ -1.26
CLK1-212ENST00000482590 ZNF589Q86UQ0 364 aaPredicted RBP7.2□□□□□ -1.26
CLK1-212ENST00000482590 IQCA1Q86XH1 822 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 COLGALT2Q8IYK4 626 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 OR2C3Q8N628 320 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 SCFD2Q8WU76 684 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 ESR2Q92731 530 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 HVCN1Q96D96 273 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 KCNJ15Q99712 375 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 ACO2Q99798 780 aaKnown RBP7.2□□□□□ -1.26
CLK1-212ENST00000482590 NUDT16L1Q9BRJ7 211 aaKnown RBP7.2□□□□□ -1.26
CLK1-212ENST00000482590 MTG1Q9BT17 334 aaPredicted RBP7.2□□□□□ -1.26
CLK1-212ENST00000482590 LSM14BQ9BX40 385 aaKnown RBP7.2□□□□□ -1.26
CLK1-212ENST00000482590 TRPV6Q9H1D0 765 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 C14orf119Q9NWQ9 140 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 POLHQ9Y253 713 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 MAGED1Q9Y5V3 778 aaPredicted RBP7.2□□□□□ -1.26
CLK1-212ENST00000482590 ATG2AQ2TAZ0 1938 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 GRIN2DO15399 1336 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 KLHL33A6NCF5 533 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 ACOT7O00154 380 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 ARIH2O95376 493 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 TXNP10599 105 aaKnown RBP7.19□□□□□ -1.26
CLK1-212ENST00000482590 GNAT1P11488 350 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 CYP2C9P11712 490 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 SMARCA1P28370 1054 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 GALNSP34059 522 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 RFC2P35250 354 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 NT5C2P49902 561 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 SPIRE1Q08AE8 756 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 BFSP2Q13515 415 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 FHL2Q14192 279 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 LLGL1Q15334 1064 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 NRN1LQ496H8 165 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 CCDC178Q5BJE1 867 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 TMEM63BQ5T3F8 832 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 AGBL4Q5VU57 503 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 OVCH2Q7RTZ1 564 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 DEFB128Q7Z7B8 93 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 PTRH1Q86Y79 214 aaKnown RBP7.19□□□□□ -1.26
CLK1-212ENST00000482590 TBC1D10CQ8IV04 446 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 FUKQ8N0W3 1084 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 KRT78Q8N1N4 520 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 CLRN3Q8NCR9 226 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 SLC30A5Q8TAD4 765 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 EDAQ92838 391 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 CCDC47Q96A33 483 aaKnown RBP7.19□□□□□ -1.26
CLK1-212ENST00000482590 TACO1Q9BSH4 297 aaKnown RBP7.19□□□□□ -1.26
CLK1-212ENST00000482590 LMAN2LQ9H0V9 348 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 KAT14Q9H8E8 782 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 PLEKHA5Q9HAU0 1116 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 DIAPH3Q9NSV4 1193 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 SAMD15Q9P1V8 674 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 DSEQ9UL01 958 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 PCDHGB6Q9Y5F9 930 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 ABCB11O95342 1321 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 NEDD4P46934 1319 aa7.19□□□□□ -1.26
CLK1-212ENST00000482590 KIAA1671Q9BY89 1806 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 ZNF213O14771 459 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 XPOTO43592 962 aaKnown RBP7.18□□□□□ -1.26
CLK1-212ENST00000482590 GOLGA8HP0CJ92 632 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 SNHG28P0DPA3 235 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 ATP2A2P16615 1042 aaKnown RBP7.18□□□□□ -1.26
CLK1-212ENST00000482590 EDNRBP24530 442 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 ELF1P32519 619 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 KRT20P35900 424 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 RABGGTBP53611 331 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 EPHA5P54756 1037 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 OCRLQ01968 901 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 KIAA0753Q2KHM9 967 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 KIZQ2M2Z5 673 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 CCDC38Q502W7 563 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 USP39Q53GS9 565 aaKnown RBP7.18□□□□□ -1.26
CLK1-212ENST00000482590 LMBRD2Q68DH5 695 aaPredicted RBP7.18□□□□□ -1.26
CLK1-212ENST00000482590 ITPRIPL1Q6GPH6 555 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 NFRKBQ6P4R8 1299 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 MAMDC2Q7Z304 686 aaPredicted RBP7.18□□□□□ -1.26
CLK1-212ENST00000482590 DDX53Q86TM3 631 aaKnown RBP7.18□□□□□ -1.26
CLK1-212ENST00000482590 C11orf74Q86VG3 221 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 ZNF713Q8N859 430 aaPredicted RBP7.18□□□□□ -1.26
CLK1-212ENST00000482590 HPS3Q969F9 1004 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 TEKT5Q96M29 485 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 ZMAT2Q96NC0 199 aaKnown RBP7.18□□□□□ -1.26
CLK1-212ENST00000482590 TTLL2Q9BWV7 592 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 FTOQ9C0B1 505 aaKnown RBP eCLIP7.18□□□□□ -1.26
CLK1-212ENST00000482590 TMEM60Q9H2L4 133 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 GPRC5BQ9NZH0 403 aa7.18□□□□□ -1.26
CLK1-212ENST00000482590 A0A087WV62 115 aa7.17□□□□□ -1.26
CLK1-212ENST00000482590 B4E171 279 aa7.17□□□□□ -1.26
CLK1-212ENST00000482590 KIF28PB7ZC32 967 aa7.17□□□□□ -1.26
CLK1-212ENST00000482590 FAM227AF5H4B4 570 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms