RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 MCCD1P59942 119 aaPredicted RBP16■□□□□ 0.15
LIMS3-203ENST00000480744 YWHAGP61981 247 aaKnown RBP eCLIP16■□□□□ 0.15
LIMS3-203ENST00000480744 IRX4P78413 519 aa16■□□□□ 0.15
LIMS3-203ENST00000480744 COG7P83436 770 aa16■□□□□ 0.15
LIMS3-203ENST00000480744 FKBP3Q00688 224 aaKnown RBP16■□□□□ 0.15
LIMS3-203ENST00000480744 RPL6Q02878 288 aaKnown RBP16■□□□□ 0.15
LIMS3-203ENST00000480744 LRMPQ12912 555 aa16■□□□□ 0.15
LIMS3-203ENST00000480744 UAP1L1Q3KQV9 507 aa16■□□□□ 0.15
LIMS3-203ENST00000480744 TRIM61Q5EBN2 209 aa16■□□□□ 0.15
LIMS3-203ENST00000480744 ARHGAP17Q68EM7 881 aa16■□□□□ 0.15
LIMS3-203ENST00000480744 ANKRD40Q6AI12 368 aa16■□□□□ 0.15
LIMS3-203ENST00000480744 ARHGAP18Q8N392 663 aa16■□□□□ 0.15
LIMS3-203ENST00000480744 GSDMAQ96QA5 445 aa16■□□□□ 0.15
LIMS3-203ENST00000480744 CACNA2D2Q9NY47 1150 aa16■□□□□ 0.15
LIMS3-203ENST00000480744 MARCH2Q9P0N8 246 aa16■□□□□ 0.15
LIMS3-203ENST00000480744 STRIP2Q9ULQ0 834 aa16■□□□□ 0.15
LIMS3-203ENST00000480744 ZNF510Q9Y2H8 683 aa16■□□□□ 0.15
LIMS3-203ENST00000480744 RAD54BQ9Y620 910 aa16■□□□□ 0.15
LIMS3-203ENST00000480744 ASCC3Q8N3C0 2202 aaKnown RBP15.99■□□□□ 0.15
LIMS3-203ENST00000480744 CHD8Q9HCK8 2581 aa15.99■□□□□ 0.15
LIMS3-203ENST00000480744 A0A1W2PQF6 199 aa15.99■□□□□ 0.15
LIMS3-203ENST00000480744 SLC12A8A0AV02 714 aa15.99■□□□□ 0.15
LIMS3-203ENST00000480744 AP5Z1O43299 807 aa15.99■□□□□ 0.15
LIMS3-203ENST00000480744 KLKB1P03952 638 aa15.99■□□□□ 0.15
LIMS3-203ENST00000480744 CISD3P0C7P0 127 aa15.99■□□□□ 0.15
LIMS3-203ENST00000480744 YWHAEP62258 255 aaKnown RBP15.99■□□□□ 0.15
LIMS3-203ENST00000480744 CUL2Q13617 745 aa15.99■□□□□ 0.15
LIMS3-203ENST00000480744 ISM2Q6H9L7 571 aa15.99■□□□□ 0.15
LIMS3-203ENST00000480744 KIAA1211LQ6NV74 962 aa15.99■□□□□ 0.15
LIMS3-203ENST00000480744 SYT12Q8IV01 421 aa15.99■□□□□ 0.15
LIMS3-203ENST00000480744 ZNF276Q8N554 614 aa15.99■□□□□ 0.15
LIMS3-203ENST00000480744 ANKRD52Q8NB46 1076 aa15.99■□□□□ 0.15
LIMS3-203ENST00000480744 IPO4Q8TEX9 1081 aaKnown RBP15.99■□□□□ 0.15
LIMS3-203ENST00000480744 NUSAP1Q9BXS6 441 aaKnown RBP15.99■□□□□ 0.15
LIMS3-203ENST00000480744 ULBP1Q9BZM6 244 aa15.99■□□□□ 0.15
LIMS3-203ENST00000480744 UBXN6Q9BZV1 441 aa15.99■□□□□ 0.15
LIMS3-203ENST00000480744 DCLK3Q9C098 648 aa15.99■□□□□ 0.15
LIMS3-203ENST00000480744 TMEM74BQ9NUR3 256 aa15.99■□□□□ 0.15
LIMS3-203ENST00000480744 HESX1Q9UBX0 185 aa15.99■□□□□ 0.15
LIMS3-203ENST00000480744 ARMCX3Q9UH62 379 aaPredicted RBP15.99■□□□□ 0.15
LIMS3-203ENST00000480744 ANGPTL2Q9UKU9 493 aa15.99■□□□□ 0.15
LIMS3-203ENST00000480744 CYP8B1Q9UNU6 501 aa15.99■□□□□ 0.15
LIMS3-203ENST00000480744 EPG5Q9HCE0 2579 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 TULP2O00295 520 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 GIPC1O14908 333 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 ZBED1O96006 694 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 CFIP05156 583 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 NDUFV2P19404 249 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 ITPKAP23677 461 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 CHKAP35790 457 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 MAPK8P45983 427 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 BCAT1P54687 386 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 PDE4CQ08493 712 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 COBLL1Q53SF7 1204 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 SGO2Q562F6 1265 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 RAB41Q5JT25 222 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 KIAA1324Q6UXG2 1013 aaKnown RBP15.98■□□□□ 0.15
LIMS3-203ENST00000480744 SLC36A4Q6YBV0 504 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 DENND1CQ8IV53 801 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 NDRG1Q92597 394 aaKnown RBP15.98■□□□□ 0.15
LIMS3-203ENST00000480744 P2RY11Q96G91 374 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 GABRG3Q99928 467 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 SLC6A17Q9H1V8 727 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 FAM124BQ9H5Z6 455 aaPredicted RBP15.98■□□□□ 0.15
LIMS3-203ENST00000480744 LRRC4Q9HBW1 653 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 EVLQ9UI08 416 aaPredicted RBP15.98■□□□□ 0.15
LIMS3-203ENST00000480744 HOOK1Q9UJC3 728 aaKnown RBP15.98■□□□□ 0.15
LIMS3-203ENST00000480744 TSPAN16Q9UKR8 245 aa15.98■□□□□ 0.15
LIMS3-203ENST00000480744 AGO1Q9UL18 857 aaKnown RBP15.98■□□□□ 0.15
LIMS3-203ENST00000480744 WASH3PC4AMC7 463 aa15.97■□□□□ 0.15
LIMS3-203ENST00000480744 CDX4O14627 284 aaPredicted RBP15.97■□□□□ 0.15
LIMS3-203ENST00000480744 PENKP01210 267 aaPredicted RBP15.97■□□□□ 0.15
LIMS3-203ENST00000480744 CYBBP04839 570 aa15.97■□□□□ 0.15
LIMS3-203ENST00000480744 PMLP29590 882 aa15.97■□□□□ 0.15
LIMS3-203ENST00000480744 DPP6P42658 865 aa15.97■□□□□ 0.15
LIMS3-203ENST00000480744 LRRC63Q05C16 580 aa15.97■□□□□ 0.15
LIMS3-203ENST00000480744 ADIGQ0VDE8 80 aa15.97■□□□□ 0.15
LIMS3-203ENST00000480744 BST2Q10589 180 aaKnown RBP15.97■□□□□ 0.15
LIMS3-203ENST00000480744 LMAN2Q12907 356 aa15.97■□□□□ 0.15
LIMS3-203ENST00000480744 STIM1Q13586 685 aa15.97■□□□□ 0.15
LIMS3-203ENST00000480744 SPDYCQ5MJ68 293 aa15.97■□□□□ 0.15
LIMS3-203ENST00000480744 SH3PXD2AQ5TCZ1 1133 aa15.97■□□□□ 0.15
LIMS3-203ENST00000480744 FYB2Q5VWT5 728 aa15.97■□□□□ 0.15
LIMS3-203ENST00000480744 ZC3H3Q8IXZ2 948 aaKnown RBP15.97■□□□□ 0.15
LIMS3-203ENST00000480744 ENGASEQ8NFI3 743 aa15.97■□□□□ 0.15
LIMS3-203ENST00000480744 UBA3Q8TBC4 463 aa15.97■□□□□ 0.15
LIMS3-203ENST00000480744 SLC35C1Q96A29 364 aa15.97■□□□□ 0.15
LIMS3-203ENST00000480744 IPO9Q96P70 1041 aaKnown RBP15.97■□□□□ 0.15
LIMS3-203ENST00000480744 COQ4Q9Y3A0 265 aa15.97■□□□□ 0.15
LIMS3-203ENST00000480744 IGHV1OR15-9A0A0B4J2B8 117 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 PSMA7O14818 248 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 XPO1O14980 1071 aaKnown RBP15.96■□□□□ 0.15
LIMS3-203ENST00000480744 ZNF217O75362 1048 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 ENGP17813 658 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 MFAP3P55082 362 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 NUCB2P80303 420 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 ZNF33AQ06730 810 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 ZNF252P-AS1Q0IIN9 211 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 STARD3Q14849 445 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 ST3GAL2Q16842 350 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms