RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 BAATQ14032 418 aaPredicted RBP21.41■■□□□ 1.02
COL13A1-208ENST00000479733 C15orf59Q2T9L4 293 aaPredicted RBP21.41■■□□□ 1.02
COL13A1-208ENST00000479733 PDPK2PQ6A1A2 396 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 TRIM74Q86UV6 250 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 TRIM73Q86UV7 250 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 UBR7Q8N806 425 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 PHF12Q96QT6 1004 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 ZNF518BQ9C0D4 1074 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 USP29Q9HBJ7 922 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 PNPLA8Q9NP80 782 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 CHCHD3Q9NX63 227 aaKnown RBP21.41■■□□□ 1.02
COL13A1-208ENST00000479733 UBAP1Q9NZ09 502 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 LZTS1Q9Y250 596 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 SMIM18P0DKX4 95 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 CD1EP15812 388 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 PRKCHP24723 683 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 HSPA1LP34931 641 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 ALDH1A3P47895 512 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 CRADDP78560 199 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 SLC27A3Q5K4L6 730 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 MAP3K21Q5TCX8 1036 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 WDR78Q5VTH9 848 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 SDCCAG8Q86SQ7 713 aaPredicted RBP21.41■■□□□ 1.02
COL13A1-208ENST00000479733 TFB1MQ8WVM0 346 aaKnown RBP21.41■■□□□ 1.02
COL13A1-208ENST00000479733 RSAD1Q9HA92 442 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 SCN9AQ15858 1988 aa21.41■■□□□ 1.02
COL13A1-208ENST00000479733 TFAP2AP05549 437 aa21.4■■□□□ 1.02
COL13A1-208ENST00000479733 PSAPP07602 524 aa21.4■■□□□ 1.02
COL13A1-208ENST00000479733 FDFT1P37268 417 aa21.4■■□□□ 1.02
COL13A1-208ENST00000479733 IDH3AP50213 366 aa21.4■■□□□ 1.02
COL13A1-208ENST00000479733 TGFB2P61812 414 aa21.4■■□□□ 1.02
COL13A1-208ENST00000479733 TAZQ16635 292 aa21.4■■□□□ 1.02
COL13A1-208ENST00000479733 NADK2Q4G0N4 442 aa21.4■■□□□ 1.02
COL13A1-208ENST00000479733 SLFN12LQ6IEE8 588 aa21.4■■□□□ 1.02
COL13A1-208ENST00000479733 CASC4Q6P4E1 433 aa21.4■■□□□ 1.02
COL13A1-208ENST00000479733 KLHDC10Q6PID8 442 aa21.4■■□□□ 1.02
COL13A1-208ENST00000479733 ZBED1O96006 694 aa21.4■■□□□ 1.02
COL13A1-208ENST00000479733 KRT19P08727 400 aa21.4■■□□□ 1.02
COL13A1-208ENST00000479733 ADORA2AP29274 412 aa21.4■■□□□ 1.02
COL13A1-208ENST00000479733 MBLAC2Q68D91 279 aa21.4■■□□□ 1.02
COL13A1-208ENST00000479733 PGM2L1Q6PCE3 622 aa21.4■■□□□ 1.02
COL13A1-208ENST00000479733 ACTRT2Q8TDY3 377 aa21.4■■□□□ 1.02
COL13A1-208ENST00000479733 PAK5Q9P286 719 aa21.4■■□□□ 1.02
COL13A1-208ENST00000479733 NR2E3Q9Y5X4 410 aa21.4■■□□□ 1.02
COL13A1-208ENST00000479733 STYXL1Q9Y6J8 313 aa21.4■■□□□ 1.02
COL13A1-208ENST00000479733 E9PBE3 544 aa21.39■■□□□ 1.02
COL13A1-208ENST00000479733 KLHL41O60662 606 aa21.39■■□□□ 1.02
COL13A1-208ENST00000479733 PLA2G6O60733 806 aa21.39■■□□□ 1.02
COL13A1-208ENST00000479733 LDHAP00338 332 aaKnown RBP21.39■■□□□ 1.02
COL13A1-208ENST00000479733 NR3C2P08235 984 aa21.39■■□□□ 1.02
COL13A1-208ENST00000479733 YWHAEP62258 255 aaKnown RBP21.39■■□□□ 1.02
COL13A1-208ENST00000479733 ENPEPQ07075 957 aa21.39■■□□□ 1.02
COL13A1-208ENST00000479733 ZNF699Q32M78 642 aa21.39■■□□□ 1.02
COL13A1-208ENST00000479733 PPP6R3Q5H9R7 873 aaPredicted RBP21.39■■□□□ 1.02
COL13A1-208ENST00000479733 XYLT1Q86Y38 959 aa21.39■■□□□ 1.02
COL13A1-208ENST00000479733 METTL25Q8N6Q8 603 aa21.39■■□□□ 1.02
COL13A1-208ENST00000479733 ABTB1Q969K4 478 aaPredicted RBP21.39■■□□□ 1.02
COL13A1-208ENST00000479733 PPP1R36Q96LQ0 422 aa21.39■■□□□ 1.02
COL13A1-208ENST00000479733 FAM210AQ96ND0 272 aa21.39■■□□□ 1.02
COL13A1-208ENST00000479733 H3BNX3 289 aa21.39■■□□□ 1.01
COL13A1-208ENST00000479733 GSRP00390 522 aa21.39■■□□□ 1.01
COL13A1-208ENST00000479733 HMGCRP04035 888 aa21.39■■□□□ 1.01
COL13A1-208ENST00000479733 FGF3P11487 239 aaPredicted RBP21.39■■□□□ 1.01
COL13A1-208ENST00000479733 ACTR2P61160 394 aa21.39■■□□□ 1.01
COL13A1-208ENST00000479733 KRT81Q14533 505 aa21.39■■□□□ 1.01
COL13A1-208ENST00000479733 CNGA3Q16281 694 aa21.39■■□□□ 1.01
COL13A1-208ENST00000479733 FAM102AQ5T9C2 384 aaPredicted RBP21.39■■□□□ 1.01
COL13A1-208ENST00000479733 C10orf107Q8IVU9 208 aa21.39■■□□□ 1.01
COL13A1-208ENST00000479733 DCUN1D1Q96GG9 259 aa21.39■■□□□ 1.01
COL13A1-208ENST00000479733 PRICKLE1Q96MT3 831 aaPredicted RBP21.39■■□□□ 1.01
COL13A1-208ENST00000479733 KLC2Q9H0B6 622 aa21.39■■□□□ 1.01
COL13A1-208ENST00000479733 JPH1Q9HDC5 661 aaPredicted RBP21.39■■□□□ 1.01
COL13A1-208ENST00000479733 AK5Q9Y6K8 562 aa21.39■■□□□ 1.01
COL13A1-208ENST00000479733 SF3B1O75533 1304 aaKnown RBP eCLIP21.39■■□□□ 1.01
COL13A1-208ENST00000479733 H0YCG3 227 aa21.39■■□□□ 1.01
COL13A1-208ENST00000479733 TRDMT1O14717 391 aaKnown RBP21.39■■□□□ 1.01
COL13A1-208ENST00000479733 BIRC5O15392 142 aa21.39■■□□□ 1.01
COL13A1-208ENST00000479733 PENKP01210 267 aaPredicted RBP21.39■■□□□ 1.01
COL13A1-208ENST00000479733 ARRB2P32121 409 aa21.39■■□□□ 1.01
COL13A1-208ENST00000479733 RGS2P41220 211 aa21.39■■□□□ 1.01
COL13A1-208ENST00000479733 PRKG1Q13976 671 aa21.39■■□□□ 1.01
COL13A1-208ENST00000479733 FBXW8Q8N3Y1 598 aa21.39■■□□□ 1.01
COL13A1-208ENST00000479733 ZNF526Q8TF50 670 aaPredicted RBP21.39■■□□□ 1.01
COL13A1-208ENST00000479733 RNPEPQ9H4A4 650 aa21.39■■□□□ 1.01
COL13A1-208ENST00000479733 RIPK3Q9Y572 518 aa21.39■■□□□ 1.01
COL13A1-208ENST00000479733 TRPA1O75762 1119 aa21.38■■□□□ 1.01
COL13A1-208ENST00000479733 RPL5P46777 297 aaKnown RBP21.38■■□□□ 1.01
COL13A1-208ENST00000479733 PPM1JQ5JR12 505 aa21.38■■□□□ 1.01
COL13A1-208ENST00000479733 ARCQ7LC44 396 aa21.38■■□□□ 1.01
COL13A1-208ENST00000479733 PPP4R1Q8TF05 950 aa21.38■■□□□ 1.01
COL13A1-208ENST00000479733 JADE3Q92613 823 aa21.38■■□□□ 1.01
COL13A1-208ENST00000479733 ZNF668Q96K58 619 aaPredicted RBP21.38■■□□□ 1.01
COL13A1-208ENST00000479733 ZNF70Q9UC06 446 aaPredicted RBP21.38■■□□□ 1.01
COL13A1-208ENST00000479733 EMCNQ9ULC0 261 aa21.38■■□□□ 1.01
COL13A1-208ENST00000479733 SORCS3Q9UPU3 1222 aa21.38■■□□□ 1.01
COL13A1-208ENST00000479733 B3GNT6Q6ZMB0 384 aa21.38■■□□□ 1.01
COL13A1-208ENST00000479733 CDR2LQ86X02 465 aaPredicted RBP21.38■■□□□ 1.01
COL13A1-208ENST00000479733 GALNT4Q8N4A0 578 aa21.38■■□□□ 1.01
COL13A1-208ENST00000479733 RNF148Q8N7C7 305 aa21.38■■□□□ 1.01
COL13A1-208ENST00000479733 CEP70Q8NHQ1 597 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms